JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:16 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4i9oa_.name2015-04-17 17:44 0 Job name flag file
[ ]jp_2KUJ79F.align2015-04-17 19:16 9.5KPSIBLAST alignment in FASTA format
[TXT]jp_2KUJ79F.als2015-04-17 19:16 1.6KAlscript command file for PS/PDF output
[ ]jp_2KUJ79F.blast.gz2015-04-17 19:16 51KCompressed PSIBLAST output file
[TXT]jp_2KUJ79F.coils.csv2015-04-17 19:16 498 COILS output in CSV format
[ ]jp_2KUJ79F.coilseq.lupas_142015-04-17 19:16 3.3KCOILS output, window length 14
[ ]jp_2KUJ79F.coilseq.lupas_212015-04-17 19:16 3.3KCOILS output, window length 21
[ ]jp_2KUJ79F.coilseq.lupas_282015-04-17 19:16 3.3KCOILS output, window length 28
[ ]jp_2KUJ79F.concise2015-04-17 19:16 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_2KUJ79F.concise.blc2015-04-17 19:16 11KBLC format prediction and alignment data
[ ]jp_2KUJ79F.concise.fasta2015-04-17 19:16 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_2KUJ79F.concise.pdf2015-04-17 19:16 64KPDF prediction and alignment data
[ ]jp_2KUJ79F.concise.ps2015-04-17 19:16 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_2KUJ79F.fasta2015-04-17 19:09 92 Input query sequence in FASTA format
[ ]jp_2KUJ79F.full_MSA.fasta2015-04-17 19:16 52KFull MSA before JPred filters in FASTA
[TXT]jp_2KUJ79F.full_MSA.fasta.noGaps.html2015-04-17 19:16 76KFull MSA before JPred filters in FASTA
[TXT]jp_2KUJ79F.full_MSA.fasta.withGaps.html2015-04-17 19:16 207KFull MSA before JPred filters in FASTA
[ ]jp_2KUJ79F.hmm2015-04-17 19:16 15KHHMer2 profile of the alignment
[TXT]jp_2KUJ79F.html2015-04-17 19:16 38KHTML prediction and alignment data
[ ]jp_2KUJ79F.input2015-04-17 17:44 85 Raw input data for analysis
[ ]jp_2KUJ79F.jalview2015-04-17 19:16 2.4KJalview annotation file for alignment
[ ]jp_2KUJ79F.jnet2015-04-17 19:16 2.9KJnet secondary structure output
[TXT]jp_2KUJ79F.profile2015-04-17 19:13 13KPSIBLAST profile from alignment
[ ]jp_2KUJ79F.pssm2015-04-17 19:16 17KPSIBLAST PSSM for Jnet
[TXT]jp_2KUJ79F.results.html2016-02-15 12:21 40KJPred results page
[TXT]jp_2KUJ79F.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_2KUJ79F.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_2KUJ79F.seq2015-04-17 17:44 92 Sequence data file
[TXT]jp_2KUJ79F.simple.html2015-04-17 19:16 1.1KBrief HTML: sequence and prediction only
[TXT]jp_2KUJ79F.svg.html2015-04-17 19:16 32KJalview SVG summary of results
[ ]jp_2KUJ79F.tar.gz2015-04-17 19:16 175KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.