JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:17 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4iaua_.name2015-04-17 15:53 0 Job name flag file
[ ]jp_nigszC3.align2015-04-17 16:16 117KPSIBLAST alignment in FASTA format
[TXT]jp_nigszC3.als2015-04-17 16:16 3.1KAlscript command file for PS/PDF output
[ ]jp_nigszC3.blast.gz2015-04-17 16:15 2.0MCompressed PSIBLAST output file
[TXT]jp_nigszC3.coils.csv2015-04-17 16:16 1.0KCOILS output in CSV format
[ ]jp_nigszC3.coilseq.lupas_142015-04-17 16:16 6.8KCOILS output, window length 14
[ ]jp_nigszC3.coilseq.lupas_212015-04-17 16:16 6.8KCOILS output, window length 21
[ ]jp_nigszC3.coilseq.lupas_282015-04-17 16:16 6.8KCOILS output, window length 28
[ ]jp_nigszC3.concise2015-04-17 16:16 230KPrediction: coiled-coil, solvent, alignment
[ ]jp_nigszC3.concise.blc2015-04-17 16:16 117KBLC format prediction and alignment data
[ ]jp_nigszC3.concise.fasta2015-04-17 16:16 119KPrediction: coiled-coil, solvent, alignment
[ ]jp_nigszC3.concise.pdf2015-04-17 16:16 688KPDF prediction and alignment data
[ ]jp_nigszC3.concise.ps2015-04-17 16:16 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_nigszC3.fasta2015-04-17 16:11 176 Input query sequence in FASTA format
[ ]jp_nigszC3.full_MSA.fasta2015-04-17 16:16 7.4MFull MSA before JPred filters in FASTA
[TXT]jp_nigszC3.full_MSA.fasta.noGaps.html2015-04-17 16:17 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_nigszC3.full_MSA.fasta.withGaps.html2015-04-17 16:17 20MFull MSA before JPred filters in FASTA
[ ]jp_nigszC3.hmm2015-04-17 16:16 30KHHMer2 profile of the alignment
[TXT]jp_nigszC3.html2015-04-17 16:16 254KHTML prediction and alignment data
[ ]jp_nigszC3.input2015-04-17 15:53 168 Raw input data for analysis
[ ]jp_nigszC3.jalview2015-04-17 16:16 4.0KJalview annotation file for alignment
[ ]jp_nigszC3.jnet2015-04-17 16:16 5.9KJnet secondary structure output
[TXT]jp_nigszC3.profile2015-04-17 16:14 26KPSIBLAST profile from alignment
[ ]jp_nigszC3.pssm2015-04-17 16:16 35KPSIBLAST PSSM for Jnet
[TXT]jp_nigszC3.results.html2016-02-15 12:21 73KJPred results page
[TXT]jp_nigszC3.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_nigszC3.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_nigszC3.seq2015-04-17 15:53 176 Sequence data file
[TXT]jp_nigszC3.simple.html2015-04-17 16:16 1.5KBrief HTML: sequence and prediction only
[TXT]jp_nigszC3.svg.html2015-04-17 16:17 65KJalview SVG summary of results
[ ]jp_nigszC3.tar.gz2015-04-17 16:17 4.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.