JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:20 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4jera_.name2015-04-17 18:21 0 Job name flag file
[ ]jp_yYNCN1T.align2015-04-17 22:20 14KPSIBLAST alignment in FASTA format
[TXT]jp_yYNCN1T.als2015-04-17 22:20 2.8KAlscript command file for PS/PDF output
[ ]jp_yYNCN1T.blast.gz2015-04-17 22:20 46KCompressed PSIBLAST output file
[TXT]jp_yYNCN1T.coils.csv2015-04-17 22:20 1.1KCOILS output in CSV format
[ ]jp_yYNCN1T.coilseq.lupas_142015-04-17 22:20 7.6KCOILS output, window length 14
[ ]jp_yYNCN1T.coilseq.lupas_212015-04-17 22:20 7.6KCOILS output, window length 21
[ ]jp_yYNCN1T.coilseq.lupas_282015-04-17 22:20 7.6KCOILS output, window length 28
[ ]jp_yYNCN1T.concise2015-04-17 22:20 34KPrediction: coiled-coil, solvent, alignment
[ ]jp_yYNCN1T.concise.blc2015-04-17 22:20 16KBLC format prediction and alignment data
[ ]jp_yYNCN1T.concise.fasta2015-04-17 22:20 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_yYNCN1T.concise.pdf2015-04-17 22:20 100KPDF prediction and alignment data
[ ]jp_yYNCN1T.concise.ps2015-04-17 22:20 1.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_yYNCN1T.fasta2015-04-17 20:12 196 Input query sequence in FASTA format
[ ]jp_yYNCN1T.full_MSA.fasta2015-04-17 22:20 55KFull MSA before JPred filters in FASTA
[TXT]jp_yYNCN1T.full_MSA.fasta.noGaps.html2015-04-17 22:20 26KFull MSA before JPred filters in FASTA
[TXT]jp_yYNCN1T.full_MSA.fasta.withGaps.html2015-04-17 22:20 229KFull MSA before JPred filters in FASTA
[ ]jp_yYNCN1T.hmm2015-04-17 22:20 34KHHMer2 profile of the alignment
[TXT]jp_yYNCN1T.html2015-04-17 22:20 41KHTML prediction and alignment data
[ ]jp_yYNCN1T.input2015-04-17 18:21 188 Raw input data for analysis
[ ]jp_yYNCN1T.jalview2015-04-17 22:20 4.4KJalview annotation file for alignment
[ ]jp_yYNCN1T.jnet2015-04-17 22:20 6.7KJnet secondary structure output
[TXT]jp_yYNCN1T.profile2015-04-17 22:08 29KPSIBLAST profile from alignment
[ ]jp_yYNCN1T.pssm2015-04-17 22:20 39KPSIBLAST PSSM for Jnet
[TXT]jp_yYNCN1T.results.html2016-02-15 12:21 80KJPred results page
[TXT]jp_yYNCN1T.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_yYNCN1T.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_yYNCN1T.seq2015-04-17 18:21 196 Sequence data file
[TXT]jp_yYNCN1T.simple.html2015-04-17 22:20 1.5KBrief HTML: sequence and prediction only
[TXT]jp_yYNCN1T.svg.html2015-04-17 22:20 72KJalview SVG summary of results
[ ]jp_yYNCN1T.tar.gz2015-04-17 22:20 235KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.