JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:24 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4jp6a_.name2015-04-17 19:34 0 Job name flag file
[ ]jp_GLHgGyx.align2015-04-17 22:24 46KPSIBLAST alignment in FASTA format
[TXT]jp_GLHgGyx.als2015-04-17 22:24 2.1KAlscript command file for PS/PDF output
[ ]jp_GLHgGyx.blast.gz2015-04-17 22:24 154KCompressed PSIBLAST output file
[TXT]jp_GLHgGyx.coils.csv2015-04-17 22:24 762 COILS output in CSV format
[ ]jp_GLHgGyx.coilseq.lupas_142015-04-17 22:24 5.1KCOILS output, window length 14
[ ]jp_GLHgGyx.coilseq.lupas_212015-04-17 22:24 5.1KCOILS output, window length 21
[ ]jp_GLHgGyx.coilseq.lupas_282015-04-17 22:24 5.1KCOILS output, window length 28
[ ]jp_GLHgGyx.concise2015-04-17 22:24 94KPrediction: coiled-coil, solvent, alignment
[ ]jp_GLHgGyx.concise.blc2015-04-17 22:24 48KBLC format prediction and alignment data
[ ]jp_GLHgGyx.concise.fasta2015-04-17 22:24 48KPrediction: coiled-coil, solvent, alignment
[ ]jp_GLHgGyx.concise.pdf2015-04-17 22:24 250KPDF prediction and alignment data
[ ]jp_GLHgGyx.concise.ps2015-04-17 22:24 5.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_GLHgGyx.fasta2015-04-17 22:19 136 Input query sequence in FASTA format
[ ]jp_GLHgGyx.full_MSA.fasta2015-04-17 22:24 456KFull MSA before JPred filters in FASTA
[TXT]jp_GLHgGyx.full_MSA.fasta.noGaps.html2015-04-17 22:24 204KFull MSA before JPred filters in FASTA
[TXT]jp_GLHgGyx.full_MSA.fasta.withGaps.html2015-04-17 22:24 2.0MFull MSA before JPred filters in FASTA
[ ]jp_GLHgGyx.hmm2015-04-17 22:24 23KHHMer2 profile of the alignment
[TXT]jp_GLHgGyx.html2015-04-17 22:24 121KHTML prediction and alignment data
[ ]jp_GLHgGyx.input2015-04-17 19:34 129 Raw input data for analysis
[ ]jp_GLHgGyx.jalview2015-04-17 22:24 3.2KJalview annotation file for alignment
[ ]jp_GLHgGyx.jnet2015-04-17 22:24 4.5KJnet secondary structure output
[TXT]jp_GLHgGyx.profile2015-04-17 22:22 20KPSIBLAST profile from alignment
[ ]jp_GLHgGyx.pssm2015-04-17 22:24 26KPSIBLAST PSSM for Jnet
[TXT]jp_GLHgGyx.results.html2016-02-15 12:21 57KJPred results page
[TXT]jp_GLHgGyx.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_GLHgGyx.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_GLHgGyx.seq2015-04-17 19:34 136 Sequence data file
[TXT]jp_GLHgGyx.simple.html2015-04-17 22:24 1.2KBrief HTML: sequence and prediction only
[TXT]jp_GLHgGyx.svg.html2015-04-17 22:24 49KJalview SVG summary of results
[ ]jp_GLHgGyx.tar.gz2015-04-17 22:24 626KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.