JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:12 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4klia2.name2015-04-17 18:58 0 Job name flag file
[ ]jp_xHYdM4u.align2015-04-17 21:12 26KPSIBLAST alignment in FASTA format
[TXT]jp_xHYdM4u.als2015-04-17 21:12 1.7KAlscript command file for PS/PDF output
[ ]jp_xHYdM4u.blast.gz2015-04-17 21:12 147KCompressed PSIBLAST output file
[TXT]jp_xHYdM4u.coils.csv2015-04-17 21:12 372 COILS output in CSV format
[ ]jp_xHYdM4u.coilseq.lupas_142015-04-17 21:12 2.4KCOILS output, window length 14
[ ]jp_xHYdM4u.coilseq.lupas_212015-04-17 21:12 2.4KCOILS output, window length 21
[ ]jp_xHYdM4u.coilseq.lupas_282015-04-17 21:12 2.4KCOILS output, window length 28
[ ]jp_xHYdM4u.concise2015-04-17 21:12 50KPrediction: coiled-coil, solvent, alignment
[ ]jp_xHYdM4u.concise.blc2015-04-17 21:12 26KBLC format prediction and alignment data
[ ]jp_xHYdM4u.concise.fasta2015-04-17 21:12 26KPrediction: coiled-coil, solvent, alignment
[ ]jp_xHYdM4u.concise.pdf2015-04-17 21:12 156KPDF prediction and alignment data
[ ]jp_xHYdM4u.concise.ps2015-04-17 21:12 2.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_xHYdM4u.fasta2015-04-17 21:07 70 Input query sequence in FASTA format
[ ]jp_xHYdM4u.full_MSA.fasta2015-04-17 21:12 214KFull MSA before JPred filters in FASTA
[TXT]jp_xHYdM4u.full_MSA.fasta.noGaps.html2015-04-17 21:12 152KFull MSA before JPred filters in FASTA
[TXT]jp_xHYdM4u.full_MSA.fasta.withGaps.html2015-04-17 21:12 776KFull MSA before JPred filters in FASTA
[ ]jp_xHYdM4u.hmm2015-04-17 21:12 11KHHMer2 profile of the alignment
[TXT]jp_xHYdM4u.html2015-04-17 21:12 100KHTML prediction and alignment data
[ ]jp_xHYdM4u.input2015-04-17 18:58 64 Raw input data for analysis
[ ]jp_xHYdM4u.jalview2015-04-17 21:12 2.0KJalview annotation file for alignment
[ ]jp_xHYdM4u.jnet2015-04-17 21:12 2.2KJnet secondary structure output
[TXT]jp_xHYdM4u.profile2015-04-17 21:11 9.5KPSIBLAST profile from alignment
[ ]jp_xHYdM4u.pssm2015-04-17 21:12 12KPSIBLAST PSSM for Jnet
[TXT]jp_xHYdM4u.results.html2016-02-15 12:21 34KJPred results page
[TXT]jp_xHYdM4u.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_xHYdM4u.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_xHYdM4u.seq2015-04-17 18:58 70 Sequence data file
[TXT]jp_xHYdM4u.simple.html2015-04-17 21:12 1.1KBrief HTML: sequence and prediction only
[TXT]jp_xHYdM4u.svg.html2015-04-17 21:12 26KJalview SVG summary of results
[ ]jp_xHYdM4u.tar.gz2015-04-17 21:12 438KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.