A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 22:27 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d4mjra1.name | 2015-04-17 19:35 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_ZC0rJ9v.align | 2015-04-17 22:26 | 128K | PSIBLAST alignment in FASTA format |
| jp_ZC0rJ9v.als | 2015-04-17 22:26 | 2.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_ZC0rJ9v.blast.gz | 2015-04-17 22:25 | 1.7M | Compressed PSIBLAST output file |
| jp_ZC0rJ9v.coils.csv | 2015-04-17 22:26 | 726 | COILS output in CSV format |
| jp_ZC0rJ9v.coilseq.lupas_14 | 2015-04-17 22:26 | 4.9K | COILS output, window length 14 |
| jp_ZC0rJ9v.coilseq.lupas_21 | 2015-04-17 22:26 | 4.9K | COILS output, window length 21 |
| jp_ZC0rJ9v.coilseq.lupas_28 | 2015-04-17 22:26 | 4.9K | COILS output, window length 28 |
| jp_ZC0rJ9v.concise | 2015-04-17 22:26 | 248K | Prediction: coiled-coil, solvent, alignment |
| jp_ZC0rJ9v.concise.blc | 2015-04-17 22:26 | 128K | BLC format prediction and alignment data |
| jp_ZC0rJ9v.concise.fasta | 2015-04-17 22:26 | 129K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_ZC0rJ9v.concise.pdf | 2015-04-17 22:26 | 895K | PDF prediction and alignment data |
| jp_ZC0rJ9v.concise.ps | 2015-04-17 22:26 | 15M | Prediction: coiled-coil, solvent, alignment |
| jp_ZC0rJ9v.fasta | 2015-04-17 22:20 | 130 | Input query sequence in FASTA format |
| jp_ZC0rJ9v.full_MSA.fasta | 2015-04-17 22:26 | 3.4M | Full MSA before JPred filters in FASTA |
| jp_ZC0rJ9v.full_MSA.fasta.noGaps.html | 2015-04-17 22:26 | 902K | Full MSA before JPred filters in FASTA |
| jp_ZC0rJ9v.full_MSA.fasta.withGaps.html | 2015-04-17 22:26 | 13M | Full MSA before JPred filters in FASTA |
| jp_ZC0rJ9v.hmm | 2015-04-17 22:26 | 22K | HHMer2 profile of the alignment |
| jp_ZC0rJ9v.html | 2015-04-17 22:26 | 324K | HTML prediction and alignment data |
| jp_ZC0rJ9v.input | 2015-04-17 19:35 | 123 | Raw input data for analysis |
| jp_ZC0rJ9v.jalview | 2015-04-17 22:26 | 3.2K | Jalview annotation file for alignment |
| jp_ZC0rJ9v.jnet | 2015-04-17 22:26 | 4.3K | Jnet secondary structure output |
| jp_ZC0rJ9v.profile | 2015-04-17 22:24 | 19K | PSIBLAST profile from alignment |
| jp_ZC0rJ9v.pssm | 2015-04-17 22:26 | 25K | PSIBLAST PSSM for Jnet |
| jp_ZC0rJ9v.results.html | 2016-02-15 12:21 | 56K | JPred results page |
| jp_ZC0rJ9v.results_jalview.html | 2016-02-24 17:19 | 13K | Jalview results options |
| jp_ZC0rJ9v.results_jalview_app.html | 2016-02-24 17:19 | 16K | HTML prediction and alignment data |
| jp_ZC0rJ9v.seq | 2015-04-17 19:35 | 130 | Sequence data file |
| jp_ZC0rJ9v.simple.html | 2015-04-17 22:26 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_ZC0rJ9v.svg.html) | jp_ZC0rJ9v.svg.html | 2015-04-17 22:27 | 48K | Jalview SVG summary of results |
| jp_ZC0rJ9v.tar.gz | 2015-04-17 22:27 | 4.2M | Archive containing complete results |
