JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-21 10:48 4.7KJPred server log file
[TXT]README2016-02-15 12:22 2.1KResults file descriptions
[TXT]e1mtp_________1A.name2015-04-21 10:39 0 Job name flag file
[ ]jp_pCNNuHr.align2015-04-21 10:47 297KPSIBLAST alignment in FASTA format
[TXT]jp_pCNNuHr.als2015-04-21 10:47 4.3KAlscript command file for PS/PDF output
[ ]jp_pCNNuHr.blast.gz2015-04-21 10:45 14MCompressed PSIBLAST output file
[TXT]jp_pCNNuHr.coils.csv2015-04-21 10:47 1.9KCOILS output in CSV format
[ ]jp_pCNNuHr.coilseq.lupas_142015-04-21 10:47 13KCOILS output, window length 14
[ ]jp_pCNNuHr.coilseq.lupas_212015-04-21 10:47 13KCOILS output, window length 21
[ ]jp_pCNNuHr.coilseq.lupas_282015-04-21 10:47 13KCOILS output, window length 28
[ ]jp_pCNNuHr.concise2015-04-21 10:47 590KPrediction: coiled-coil, solvent, alignment
[ ]jp_pCNNuHr.concise.blc2015-04-21 10:47 298KBLC format prediction and alignment data
[ ]jp_pCNNuHr.concise.fasta2015-04-21 10:47 301KPrediction: coiled-coil, solvent, alignment
[ ]jp_pCNNuHr.concise.pdf2015-04-21 10:47 2.1MPDF prediction and alignment data
[ ]jp_pCNNuHr.concise.ps2015-04-21 10:47 38MPrediction: coiled-coil, solvent, alignment
[ ]jp_pCNNuHr.fasta2015-04-21 10:39 337 Input query sequence in FASTA format
[ ]jp_pCNNuHr.full_MSA.fasta2015-04-21 10:46 14MFull MSA before JPred filters in FASTA
[TXT]jp_pCNNuHr.full_MSA.fasta.noGaps.html2015-04-21 10:48 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_pCNNuHr.full_MSA.fasta.withGaps.html2015-04-21 10:48 39MFull MSA before JPred filters in FASTA
[ ]jp_pCNNuHr.hmm2015-04-21 10:47 60KHHMer2 profile of the alignment
[TXT]jp_pCNNuHr.html2015-04-21 10:47 490KHTML prediction and alignment data
[ ]jp_pCNNuHr.input2015-04-21 10:39 327 Raw input data for analysis
[ ]jp_pCNNuHr.jalview2015-04-21 10:47 7.2KJalview annotation file for alignment
[ ]jp_pCNNuHr.jnet2015-04-21 10:47 12KJnet secondary structure output
[TXT]jp_pCNNuHr.profile2015-04-21 10:44 51KPSIBLAST profile from alignment
[ ]jp_pCNNuHr.pssm2015-04-21 10:47 69KPSIBLAST PSSM for Jnet
[TXT]jp_pCNNuHr.results.html2016-02-15 12:22 137KJPred results page
[TXT]jp_pCNNuHr.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_pCNNuHr.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_pCNNuHr.seq2015-04-21 10:39 337 Sequence data file
[TXT]jp_pCNNuHr.simple.html2015-04-21 10:47 2.0KBrief HTML: sequence and prediction only
[TXT]jp_pCNNuHr.svg.html2015-04-21 10:48 129KJalview SVG summary of results
[ ]jp_pCNNuHr.tar.gz2015-04-21 10:48 21MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.