JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-21 10:43 4.7KJPred server log file
[TXT]README2016-02-15 12:22 2.1KResults file descriptions
[TXT]e1qd6_________1C.name2015-04-21 10:39 0 Job name flag file
[ ]jp_DfqjAHx.align2015-04-21 10:42 117KPSIBLAST alignment in FASTA format
[TXT]jp_DfqjAHx.als2015-04-21 10:42 3.6KAlscript command file for PS/PDF output
[ ]jp_DfqjAHx.blast.gz2015-04-21 10:42 729KCompressed PSIBLAST output file
[TXT]jp_DfqjAHx.coils.csv2015-04-21 10:42 1.4KCOILS output in CSV format
[ ]jp_DfqjAHx.coilseq.lupas_142015-04-21 10:42 10KCOILS output, window length 14
[ ]jp_DfqjAHx.coilseq.lupas_212015-04-21 10:42 10KCOILS output, window length 21
[ ]jp_DfqjAHx.coilseq.lupas_282015-04-21 10:42 10KCOILS output, window length 28
[ ]jp_DfqjAHx.concise2015-04-21 10:42 236KPrediction: coiled-coil, solvent, alignment
[ ]jp_DfqjAHx.concise.blc2015-04-21 10:42 119KBLC format prediction and alignment data
[ ]jp_DfqjAHx.concise.fasta2015-04-21 10:42 119KPrediction: coiled-coil, solvent, alignment
[ ]jp_DfqjAHx.concise.pdf2015-04-21 10:42 803KPDF prediction and alignment data
[ ]jp_DfqjAHx.concise.ps2015-04-21 10:42 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_DfqjAHx.fasta2015-04-21 10:39 256 Input query sequence in FASTA format
[ ]jp_DfqjAHx.full_MSA.fasta2015-04-21 10:42 787KFull MSA before JPred filters in FASTA
[TXT]jp_DfqjAHx.full_MSA.fasta.noGaps.html2015-04-21 10:42 277KFull MSA before JPred filters in FASTA
[TXT]jp_DfqjAHx.full_MSA.fasta.withGaps.html2015-04-21 10:42 3.4MFull MSA before JPred filters in FASTA
[ ]jp_DfqjAHx.hmm2015-04-21 10:42 45KHHMer2 profile of the alignment
[TXT]jp_DfqjAHx.html2015-04-21 10:42 226KHTML prediction and alignment data
[ ]jp_DfqjAHx.input2015-04-21 10:39 247 Raw input data for analysis
[ ]jp_DfqjAHx.jalview2015-04-21 10:42 5.6KJalview annotation file for alignment
[ ]jp_DfqjAHx.jnet2015-04-21 10:42 8.8KJnet secondary structure output
[TXT]jp_DfqjAHx.profile2015-04-21 10:41 38KPSIBLAST profile from alignment
[ ]jp_DfqjAHx.pssm2015-04-21 10:42 52KPSIBLAST PSSM for Jnet
[TXT]jp_DfqjAHx.results.html2016-02-15 12:22 102KJPred results page
[TXT]jp_DfqjAHx.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_DfqjAHx.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_DfqjAHx.seq2015-04-21 10:39 256 Sequence data file
[TXT]jp_DfqjAHx.simple.html2015-04-21 10:42 1.7KBrief HTML: sequence and prediction only
[TXT]jp_DfqjAHx.svg.html2015-04-21 10:42 94KJalview SVG summary of results
[ ]jp_DfqjAHx.tar.gz2015-04-21 10:43 2.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.