JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-21 10:49 4.7KJPred server log file
[TXT]README2016-02-15 12:22 2.1KResults file descriptions
[TXT]e1qqp_________12.name2015-04-21 10:39 0 Job name flag file
[ ]jp_zU6Qq3N.align2015-04-21 10:49 139KPSIBLAST alignment in FASTA format
[TXT]jp_zU6Qq3N.als2015-04-21 10:49 3.2KAlscript command file for PS/PDF output
[ ]jp_zU6Qq3N.blast.gz2015-04-21 10:48 846KCompressed PSIBLAST output file
[TXT]jp_zU6Qq3N.coils.csv2015-04-21 10:49 1.3KCOILS output in CSV format
[ ]jp_zU6Qq3N.coilseq.lupas_142015-04-21 10:49 9.1KCOILS output, window length 14
[ ]jp_zU6Qq3N.coilseq.lupas_212015-04-21 10:49 9.1KCOILS output, window length 21
[ ]jp_zU6Qq3N.coilseq.lupas_282015-04-21 10:49 9.1KCOILS output, window length 28
[ ]jp_zU6Qq3N.concise2015-04-21 10:49 278KPrediction: coiled-coil, solvent, alignment
[ ]jp_zU6Qq3N.concise.blc2015-04-21 10:49 140KBLC format prediction and alignment data
[ ]jp_zU6Qq3N.concise.fasta2015-04-21 10:49 142KPrediction: coiled-coil, solvent, alignment
[ ]jp_zU6Qq3N.concise.pdf2015-04-21 10:49 795KPDF prediction and alignment data
[ ]jp_zU6Qq3N.concise.ps2015-04-21 10:49 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_zU6Qq3N.fasta2015-04-21 10:39 232 Input query sequence in FASTA format
[ ]jp_zU6Qq3N.full_MSA.fasta2015-04-21 10:48 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_zU6Qq3N.full_MSA.fasta.noGaps.html2015-04-21 10:49 496KFull MSA before JPred filters in FASTA
[TXT]jp_zU6Qq3N.full_MSA.fasta.withGaps.html2015-04-21 10:49 8.5MFull MSA before JPred filters in FASTA
[ ]jp_zU6Qq3N.hmm2015-04-21 10:49 41KHHMer2 profile of the alignment
[TXT]jp_zU6Qq3N.html2015-04-21 10:49 273KHTML prediction and alignment data
[ ]jp_zU6Qq3N.input2015-04-21 10:39 223 Raw input data for analysis
[ ]jp_zU6Qq3N.jalview2015-04-21 10:49 5.0KJalview annotation file for alignment
[ ]jp_zU6Qq3N.jnet2015-04-21 10:49 7.9KJnet secondary structure output
[TXT]jp_zU6Qq3N.profile2015-04-21 10:46 35KPSIBLAST profile from alignment
[ ]jp_zU6Qq3N.pssm2015-04-21 10:49 46KPSIBLAST PSSM for Jnet
[TXT]jp_zU6Qq3N.results.html2016-02-15 12:22 93KJPred results page
[TXT]jp_zU6Qq3N.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_zU6Qq3N.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_zU6Qq3N.seq2015-04-21 10:39 232 Sequence data file
[TXT]jp_zU6Qq3N.simple.html2015-04-21 10:49 1.6KBrief HTML: sequence and prediction only
[TXT]jp_zU6Qq3N.svg.html2015-04-21 10:49 85KJalview SVG summary of results
[ ]jp_zU6Qq3N.tar.gz2015-04-21 10:49 2.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.