JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:12 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1aiea_.name2015-04-17 16:31 0 Job name flag file
[ ]jp_1wBLzAE.align2015-04-17 17:12 1.8KPSIBLAST alignment in FASTA format
[TXT]jp_1wBLzAE.als2015-04-17 17:12 1.4KAlscript command file for PS/PDF output
[ ]jp_1wBLzAE.blast.gz2015-04-17 17:12 6.3KCompressed PSIBLAST output file
[TXT]jp_1wBLzAE.coils.csv2015-04-17 17:12 216 COILS output in CSV format
[ ]jp_1wBLzAE.coilseq.lupas_142015-04-17 17:12 1.3KCOILS output, window length 14
[ ]jp_1wBLzAE.coilseq.lupas_212015-04-17 17:12 1.3KCOILS output, window length 21
[ ]jp_1wBLzAE.coilseq.lupas_282015-04-17 17:12 1.3KCOILS output, window length 28
[ ]jp_1wBLzAE.concise2015-04-17 17:12 4.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_1wBLzAE.concise.blc2015-04-17 17:12 2.3KBLC format prediction and alignment data
[ ]jp_1wBLzAE.concise.fasta2015-04-17 17:12 2.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_1wBLzAE.concise.pdf2015-04-17 17:12 22KPDF prediction and alignment data
[ ]jp_1wBLzAE.concise.ps2015-04-17 17:12 393KPrediction: coiled-coil, solvent, alignment
[ ]jp_1wBLzAE.fasta2015-04-17 17:09 44 Input query sequence in FASTA format
[ ]jp_1wBLzAE.full_MSA.fasta2015-04-17 17:12 5.2KFull MSA before JPred filters in FASTA
[TXT]jp_1wBLzAE.full_MSA.fasta.noGaps.html2015-04-17 17:12 17KFull MSA before JPred filters in FASTA
[TXT]jp_1wBLzAE.full_MSA.fasta.withGaps.html2015-04-17 17:12 17KFull MSA before JPred filters in FASTA
[ ]jp_1wBLzAE.hmm2015-04-17 17:12 5.8KHHMer2 profile of the alignment
[TXT]jp_1wBLzAE.html2015-04-17 17:12 14KHTML prediction and alignment data
[ ]jp_1wBLzAE.input2015-04-17 16:31 38 Raw input data for analysis
[ ]jp_1wBLzAE.jalview2015-04-17 17:12 1.5KJalview annotation file for alignment
[ ]jp_1wBLzAE.jnet2015-04-17 17:12 1.2KJnet secondary structure output
[TXT]jp_1wBLzAE.profile2015-04-17 17:11 5.4KPSIBLAST profile from alignment
[ ]jp_1wBLzAE.pssm2015-04-17 17:12 6.7KPSIBLAST PSSM for Jnet
[TXT]jp_1wBLzAE.results.html2016-02-15 12:16 23KJPred results page
[TXT]jp_1wBLzAE.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_1wBLzAE.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_1wBLzAE.seq2015-04-17 16:31 44 Sequence data file
[TXT]jp_1wBLzAE.simple.html2015-04-17 17:12 972 Brief HTML: sequence and prediction only
[TXT]jp_1wBLzAE.svg.html2015-04-17 17:12 15KJalview SVG summary of results
[ ]jp_1wBLzAE.tar.gz2015-04-17 17:12 44KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.