A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:16 | 4.7K | JPred server log file |
| README | 2016-02-15 12:16 | 2.1K | Results file descriptions |
| d1b0na1.name | 2015-04-17 18:22 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_i6udSut.align | 2015-04-17 20:16 | 2.9K | PSIBLAST alignment in FASTA format |
| jp_i6udSut.als | 2015-04-17 20:16 | 1.4K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_i6udSut.blast.gz | 2015-04-17 20:16 | 6.9K | Compressed PSIBLAST output file |
| jp_i6udSut.coils.csv | 2015-04-17 20:16 | 240 | COILS output in CSV format |
| jp_i6udSut.coilseq.lupas_14 | 2015-04-17 20:16 | 1.5K | COILS output, window length 14 |
| jp_i6udSut.coilseq.lupas_21 | 2015-04-17 20:16 | 1.5K | COILS output, window length 21 |
| jp_i6udSut.coilseq.lupas_28 | 2015-04-17 20:16 | 1.5K | COILS output, window length 28 |
| jp_i6udSut.concise | 2015-04-17 20:16 | 6.7K | Prediction: coiled-coil, solvent, alignment |
| jp_i6udSut.concise.blc | 2015-04-17 20:16 | 3.5K | BLC format prediction and alignment data |
| jp_i6udSut.concise.fasta | 2015-04-17 20:16 | 3.4K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_i6udSut.concise.pdf | 2015-04-17 20:16 | 17K | PDF prediction and alignment data |
| jp_i6udSut.concise.ps | 2015-04-17 20:16 | 313K | Prediction: coiled-coil, solvent, alignment |
| jp_i6udSut.fasta | 2015-04-17 20:13 | 48 | Input query sequence in FASTA format |
| jp_i6udSut.full_MSA.fasta | 2015-04-17 20:16 | 5.9K | Full MSA before JPred filters in FASTA |
| jp_i6udSut.full_MSA.fasta.noGaps.html | 2015-04-17 20:16 | 16K | Full MSA before JPred filters in FASTA |
| jp_i6udSut.full_MSA.fasta.withGaps.html | 2015-04-17 20:16 | 23K | Full MSA before JPred filters in FASTA |
| jp_i6udSut.hmm | 2015-04-17 20:16 | 6.6K | HHMer2 profile of the alignment |
| jp_i6udSut.html | 2015-04-17 20:16 | 19K | HTML prediction and alignment data |
| jp_i6udSut.input | 2015-04-17 18:22 | 42 | Raw input data for analysis |
| jp_i6udSut.jalview | 2015-04-17 20:16 | 1.5K | Jalview annotation file for alignment |
| jp_i6udSut.jnet | 2015-04-17 20:16 | 1.4K | Jnet secondary structure output |
| jp_i6udSut.profile | 2015-04-17 20:15 | 6.0K | PSIBLAST profile from alignment |
| jp_i6udSut.pssm | 2015-04-17 20:16 | 7.5K | PSIBLAST PSSM for Jnet |
| jp_i6udSut.results.html | 2016-02-15 12:16 | 25K | JPred results page |
| jp_i6udSut.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_i6udSut.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_i6udSut.seq | 2015-04-17 18:22 | 48 | Sequence data file |
| jp_i6udSut.simple.html | 2015-04-17 20:16 | 1.0K | Brief HTML: sequence and prediction only |
![[TXT]](jp_i6udSut.svg.html) | jp_i6udSut.svg.html | 2015-04-17 20:16 | 17K | Jalview SVG summary of results |
| jp_i6udSut.tar.gz | 2015-04-17 20:16 | 43K | Archive containing complete results |
