JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:16 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1b25a1.name2015-04-17 17:45 0 Job name flag file
[ ]jp_XJp4RFo.align2015-04-17 19:15 379KPSIBLAST alignment in FASTA format
[TXT]jp_XJp4RFo.als2015-04-17 19:15 4.1KAlscript command file for PS/PDF output
[ ]jp_XJp4RFo.blast.gz2015-04-17 19:14 3.1MCompressed PSIBLAST output file
[TXT]jp_XJp4RFo.coils.csv2015-04-17 19:15 2.4KCOILS output in CSV format
[ ]jp_XJp4RFo.coilseq.lupas_142015-04-17 19:15 17KCOILS output, window length 14
[ ]jp_XJp4RFo.coilseq.lupas_212015-04-17 19:15 17KCOILS output, window length 21
[ ]jp_XJp4RFo.coilseq.lupas_282015-04-17 19:15 17KCOILS output, window length 28
[ ]jp_XJp4RFo.concise2015-04-17 19:15 756KPrediction: coiled-coil, solvent, alignment
[ ]jp_XJp4RFo.concise.blc2015-04-17 19:15 379KBLC format prediction and alignment data
[ ]jp_XJp4RFo.concise.fasta2015-04-17 19:15 383KPrediction: coiled-coil, solvent, alignment
[ ]jp_XJp4RFo.concise.pdf2015-04-17 19:16 2.6MPDF prediction and alignment data
[ ]jp_XJp4RFo.concise.ps2015-04-17 19:15 48MPrediction: coiled-coil, solvent, alignment
[ ]jp_XJp4RFo.fasta2015-04-17 19:10 419 Input query sequence in FASTA format
[ ]jp_XJp4RFo.full_MSA.fasta2015-04-17 19:14 5.4MFull MSA before JPred filters in FASTA
[TXT]jp_XJp4RFo.full_MSA.fasta.noGaps.html2015-04-17 19:16 737KFull MSA before JPred filters in FASTA
[TXT]jp_XJp4RFo.full_MSA.fasta.withGaps.html2015-04-17 19:16 16MFull MSA before JPred filters in FASTA
[ ]jp_XJp4RFo.hmm2015-04-17 19:15 75KHHMer2 profile of the alignment
[TXT]jp_XJp4RFo.html2015-04-17 19:15 588KHTML prediction and alignment data
[ ]jp_XJp4RFo.input2015-04-17 17:45 408 Raw input data for analysis
[ ]jp_XJp4RFo.jalview2015-04-17 19:15 8.8KJalview annotation file for alignment
[ ]jp_XJp4RFo.jnet2015-04-17 19:15 15KJnet secondary structure output
[TXT]jp_XJp4RFo.profile2015-04-17 19:13 64KPSIBLAST profile from alignment
[ ]jp_XJp4RFo.pssm2015-04-17 19:15 86KPSIBLAST PSSM for Jnet
[TXT]jp_XJp4RFo.results.html2016-02-15 12:16 166KJPred results page
[TXT]jp_XJp4RFo.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_XJp4RFo.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_XJp4RFo.seq2015-04-17 17:45 419 Sequence data file
[TXT]jp_XJp4RFo.simple.html2015-04-17 19:15 2.1KBrief HTML: sequence and prediction only
[TXT]jp_XJp4RFo.svg.html2015-04-17 19:16 158KJalview SVG summary of results
[ ]jp_XJp4RFo.tar.gz2015-04-17 19:16 7.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.