JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:34 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1c1ka_.name2015-04-17 14:57 0 Job name flag file
[ ]jp_i3tW1o_.align2015-04-17 15:34 8.8KPSIBLAST alignment in FASTA format
[TXT]jp_i3tW1o_.als2015-04-17 15:34 3.5KAlscript command file for PS/PDF output
[ ]jp_i3tW1o_.blast.gz2015-04-17 15:34 18KCompressed PSIBLAST output file
[TXT]jp_i3tW1o_.coils.csv2015-04-17 15:34 1.3KCOILS output in CSV format
[ ]jp_i3tW1o_.coilseq.lupas_142015-04-17 15:34 9.1KCOILS output, window length 14
[ ]jp_i3tW1o_.coilseq.lupas_212015-04-17 15:34 9.1KCOILS output, window length 21
[ ]jp_i3tW1o_.coilseq.lupas_282015-04-17 15:34 9.1KCOILS output, window length 28
[ ]jp_i3tW1o_.concise2015-04-17 15:34 26KPrediction: coiled-coil, solvent, alignment
[ ]jp_i3tW1o_.concise.blc2015-04-17 15:34 12KBLC format prediction and alignment data
[ ]jp_i3tW1o_.concise.fasta2015-04-17 15:34 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_i3tW1o_.concise.pdf2015-04-17 15:34 81KPDF prediction and alignment data
[ ]jp_i3tW1o_.concise.ps2015-04-17 15:34 1.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_i3tW1o_.fasta2015-04-17 14:57 233 Input query sequence in FASTA format
[ ]jp_i3tW1o_.full_MSA.fasta2015-04-17 15:34 15KFull MSA before JPred filters in FASTA
[TXT]jp_i3tW1o_.full_MSA.fasta.noGaps.html2015-04-17 15:34 19KFull MSA before JPred filters in FASTA
[TXT]jp_i3tW1o_.full_MSA.fasta.withGaps.html2015-04-17 15:34 62KFull MSA before JPred filters in FASTA
[ ]jp_i3tW1o_.hmm2015-04-17 15:34 41KHHMer2 profile of the alignment
[TXT]jp_i3tW1o_.html2015-04-17 15:34 37KHTML prediction and alignment data
[ ]jp_i3tW1o_.input2015-04-17 14:57 224 Raw input data for analysis
[ ]jp_i3tW1o_.jalview2015-04-17 15:34 5.2KJalview annotation file for alignment
[ ]jp_i3tW1o_.jnet2015-04-17 15:34 8.0KJnet secondary structure output
[TXT]jp_i3tW1o_.profile2015-04-17 15:32 35KPSIBLAST profile from alignment
[ ]jp_i3tW1o_.pssm2015-04-17 15:34 47KPSIBLAST PSSM for Jnet
[TXT]jp_i3tW1o_.results.html2016-02-15 12:16 99KJPred results page
[TXT]jp_i3tW1o_.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_i3tW1o_.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_i3tW1o_.seq2015-04-17 14:57 233 Sequence data file
[TXT]jp_i3tW1o_.simple.html2015-04-17 15:34 1.7KBrief HTML: sequence and prediction only
[TXT]jp_i3tW1o_.svg.html2015-04-17 15:34 91KJalview SVG summary of results
[ ]jp_i3tW1o_.tar.gz2015-04-17 15:34 179KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.