JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:13 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1ci4a_.name2015-04-17 16:32 0 Job name flag file
[ ]jp_Fvulwwh.align2015-04-17 17:12 11KPSIBLAST alignment in FASTA format
[TXT]jp_Fvulwwh.als2015-04-17 17:12 2.0KAlscript command file for PS/PDF output
[ ]jp_Fvulwwh.blast.gz2015-04-17 17:12 36KCompressed PSIBLAST output file
[TXT]jp_Fvulwwh.coils.csv2015-04-17 17:12 564 COILS output in CSV format
[ ]jp_Fvulwwh.coilseq.lupas_142015-04-17 17:12 3.7KCOILS output, window length 14
[ ]jp_Fvulwwh.coilseq.lupas_212015-04-17 17:12 3.7KCOILS output, window length 21
[ ]jp_Fvulwwh.coilseq.lupas_282015-04-17 17:12 3.7KCOILS output, window length 28
[ ]jp_Fvulwwh.concise2015-04-17 17:12 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_Fvulwwh.concise.blc2015-04-17 17:12 12KBLC format prediction and alignment data
[ ]jp_Fvulwwh.concise.fasta2015-04-17 17:12 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_Fvulwwh.concise.pdf2015-04-17 17:12 70KPDF prediction and alignment data
[ ]jp_Fvulwwh.concise.ps2015-04-17 17:12 1.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_Fvulwwh.fasta2015-04-17 17:09 103 Input query sequence in FASTA format
[ ]jp_Fvulwwh.full_MSA.fasta2015-04-17 17:12 36KFull MSA before JPred filters in FASTA
[TXT]jp_Fvulwwh.full_MSA.fasta.noGaps.html2015-04-17 17:12 44KFull MSA before JPred filters in FASTA
[TXT]jp_Fvulwwh.full_MSA.fasta.withGaps.html2015-04-17 17:12 131KFull MSA before JPred filters in FASTA
[ ]jp_Fvulwwh.hmm2015-04-17 17:12 17KHHMer2 profile of the alignment
[TXT]jp_Fvulwwh.html2015-04-17 17:12 40KHTML prediction and alignment data
[ ]jp_Fvulwwh.input2015-04-17 16:32 96 Raw input data for analysis
[ ]jp_Fvulwwh.jalview2015-04-17 17:12 2.6KJalview annotation file for alignment
[ ]jp_Fvulwwh.jnet2015-04-17 17:12 3.3KJnet secondary structure output
[TXT]jp_Fvulwwh.profile2015-04-17 17:11 15KPSIBLAST profile from alignment
[ ]jp_Fvulwwh.pssm2015-04-17 17:12 19KPSIBLAST PSSM for Jnet
[TXT]jp_Fvulwwh.results.html2016-02-15 12:16 46KJPred results page
[TXT]jp_Fvulwwh.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Fvulwwh.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Fvulwwh.seq2015-04-17 16:32 103 Sequence data file
[TXT]jp_Fvulwwh.simple.html2015-04-17 17:12 1.2KBrief HTML: sequence and prediction only
[TXT]jp_Fvulwwh.svg.html2015-04-17 17:13 38KJalview SVG summary of results
[ ]jp_Fvulwwh.tar.gz2015-04-17 17:13 167KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.