JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:58 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1cq3a_.name2015-04-17 17:09 0 Job name flag file
[ ]jp_0AfYkDl.align2015-04-17 19:58 2.4KPSIBLAST alignment in FASTA format
[TXT]jp_0AfYkDl.als2015-04-17 19:58 3.3KAlscript command file for PS/PDF output
[ ]jp_0AfYkDl.blast.gz2015-04-17 19:58 6.3KCompressed PSIBLAST output file
[TXT]jp_0AfYkDl.coils.csv2015-04-17 19:58 1.3KCOILS output in CSV format
[ ]jp_0AfYkDl.coilseq.lupas_142015-04-17 19:58 9.4KCOILS output, window length 14
[ ]jp_0AfYkDl.coilseq.lupas_212015-04-17 19:58 9.4KCOILS output, window length 21
[ ]jp_0AfYkDl.coilseq.lupas_282015-04-17 19:58 9.4KCOILS output, window length 28
[ ]jp_0AfYkDl.concise2015-04-17 19:58 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_0AfYkDl.concise.blc2015-04-17 19:58 5.7KBLC format prediction and alignment data
[ ]jp_0AfYkDl.concise.fasta2015-04-17 19:58 4.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_0AfYkDl.concise.pdf2015-04-17 19:58 35KPDF prediction and alignment data
[ ]jp_0AfYkDl.concise.ps2015-04-17 19:58 644KPrediction: coiled-coil, solvent, alignment
[ ]jp_0AfYkDl.fasta2015-04-17 18:12 240 Input query sequence in FASTA format
[ ]jp_0AfYkDl.full_MSA.fasta2015-04-17 19:58 8.6KFull MSA before JPred filters in FASTA
[TXT]jp_0AfYkDl.full_MSA.fasta.noGaps.html2015-04-17 19:58 7.3KFull MSA before JPred filters in FASTA
[TXT]jp_0AfYkDl.full_MSA.fasta.withGaps.html2015-04-17 19:58 21KFull MSA before JPred filters in FASTA
[ ]jp_0AfYkDl.hmm2015-04-17 19:58 42KHHMer2 profile of the alignment
[TXT]jp_0AfYkDl.html2015-04-17 19:58 22KHTML prediction and alignment data
[ ]jp_0AfYkDl.input2015-04-17 17:09 231 Raw input data for analysis
[ ]jp_0AfYkDl.jalview2015-04-17 19:58 5.2KJalview annotation file for alignment
[ ]jp_0AfYkDl.jnet2015-04-17 19:58 8.2KJnet secondary structure output
[TXT]jp_0AfYkDl.profile2015-04-17 19:48 36KPSIBLAST profile from alignment
[ ]jp_0AfYkDl.pssm2015-04-17 19:58 48KPSIBLAST PSSM for Jnet
[TXT]jp_0AfYkDl.results.html2016-02-15 12:16 98KJPred results page
[TXT]jp_0AfYkDl.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_0AfYkDl.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_0AfYkDl.seq2015-04-17 17:09 240 Sequence data file
[TXT]jp_0AfYkDl.simple.html2015-04-17 19:58 1.6KBrief HTML: sequence and prediction only
[TXT]jp_0AfYkDl.svg.html2015-04-17 19:58 90KJalview SVG summary of results
[ ]jp_0AfYkDl.tar.gz2015-04-17 19:58 95KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.