JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_xRZSPF0.als2015-04-17 16:28 4.7KAlscript command file for PS/PDF output
[ ]jp_xRZSPF0.tar.gz2015-04-17 16:28 3.7MArchive containing complete results
[ ]jp_xRZSPF0.concise.blc2015-04-17 16:28 171KBLC format prediction and alignment data
[TXT]jp_xRZSPF0.simple.html2015-04-17 16:28 2.0KBrief HTML: sequence and prediction only
[TXT]jp_xRZSPF0.coils.csv2015-04-17 16:28 1.7KCOILS output in CSV format
[ ]jp_xRZSPF0.coilseq.lupas_142015-04-17 16:28 12KCOILS output, window length 14
[ ]jp_xRZSPF0.coilseq.lupas_212015-04-17 16:28 12KCOILS output, window length 21
[ ]jp_xRZSPF0.coilseq.lupas_282015-04-17 16:28 12KCOILS output, window length 28
[ ]jp_xRZSPF0.blast.gz2015-04-17 16:27 1.4MCompressed PSIBLAST output file
[ ]jp_xRZSPF0.full_MSA.fasta2015-04-17 16:27 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_xRZSPF0.full_MSA.fasta.noGaps.html2015-04-17 16:28 390KFull MSA before JPred filters in FASTA
[TXT]jp_xRZSPF0.full_MSA.fasta.withGaps.html2015-04-17 16:28 8.0MFull MSA before JPred filters in FASTA
[ ]jp_xRZSPF0.hmm2015-04-17 16:27 54KHHMer2 profile of the alignment
[TXT]jp_xRZSPF0.html2015-04-17 16:28 304KHTML prediction and alignment data
[TXT]jp_xRZSPF0.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_xRZSPF0.fasta2015-04-17 15:18 306 Input query sequence in FASTA format
[TXT]jp_xRZSPF0.results.html2016-02-15 12:16 126KJPred results page
[TXT]LOG2015-04-17 16:28 4.7KJPred server log file
[TXT]jp_xRZSPF0.svg.html2015-04-17 16:28 118KJalview SVG summary of results
[ ]jp_xRZSPF0.jalview2015-04-17 16:28 6.6KJalview annotation file for alignment
[TXT]jp_xRZSPF0.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_xRZSPF0.jnet2015-04-17 16:28 11KJnet secondary structure output
[TXT]d1d3ya_.name2015-04-17 15:18 0 Job name flag file
[ ]jp_xRZSPF0.concise.pdf2015-04-17 16:28 1.2MPDF prediction and alignment data
[ ]jp_xRZSPF0.pssm2015-04-17 16:27 62KPSIBLAST PSSM for Jnet
[ ]jp_xRZSPF0.align2015-04-17 16:27 170KPSIBLAST alignment in FASTA format
[TXT]jp_xRZSPF0.profile2015-04-17 16:16 46KPSIBLAST profile from alignment
[ ]jp_xRZSPF0.concise2015-04-17 16:28 341KPrediction: coiled-coil, solvent, alignment
[ ]jp_xRZSPF0.concise.fasta2015-04-17 16:28 173KPrediction: coiled-coil, solvent, alignment
[ ]jp_xRZSPF0.concise.ps2015-04-17 16:28 21MPrediction: coiled-coil, solvent, alignment
[ ]jp_xRZSPF0.input2015-04-17 15:18 296 Raw input data for analysis
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[ ]jp_xRZSPF0.seq2015-04-17 15:18 306 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.