JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_pp5f7iI.als2015-04-17 19:13 2.3KAlscript command file for PS/PDF output
[ ]jp_pp5f7iI.tar.gz2015-04-17 19:13 87KArchive containing complete results
[ ]jp_pp5f7iI.concise.blc2015-04-17 19:13 5.6KBLC format prediction and alignment data
[TXT]jp_pp5f7iI.simple.html2015-04-17 19:13 1.3KBrief HTML: sequence and prediction only
[TXT]jp_pp5f7iI.coils.csv2015-04-17 19:13 684 COILS output in CSV format
[ ]jp_pp5f7iI.coilseq.lupas_142015-04-17 19:13 4.6KCOILS output, window length 14
[ ]jp_pp5f7iI.coilseq.lupas_212015-04-17 19:13 4.6KCOILS output, window length 21
[ ]jp_pp5f7iI.coilseq.lupas_282015-04-17 19:13 4.6KCOILS output, window length 28
[ ]jp_pp5f7iI.blast.gz2015-04-17 19:13 9.5KCompressed PSIBLAST output file
[ ]jp_pp5f7iI.full_MSA.fasta2015-04-17 19:13 11KFull MSA before JPred filters in FASTA
[TXT]jp_pp5f7iI.full_MSA.fasta.noGaps.html2015-04-17 19:13 15KFull MSA before JPred filters in FASTA
[TXT]jp_pp5f7iI.full_MSA.fasta.withGaps.html2015-04-17 19:13 38KFull MSA before JPred filters in FASTA
[ ]jp_pp5f7iI.hmm2015-04-17 19:13 20KHHMer2 profile of the alignment
[TXT]jp_pp5f7iI.html2015-04-17 19:13 20KHTML prediction and alignment data
[TXT]jp_pp5f7iI.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_pp5f7iI.fasta2015-04-17 19:11 123 Input query sequence in FASTA format
[TXT]jp_pp5f7iI.results.html2016-02-15 12:16 52KJPred results page
[TXT]LOG2015-04-17 19:13 4.7KJPred server log file
[TXT]jp_pp5f7iI.svg.html2015-04-17 19:13 44KJalview SVG summary of results
[ ]jp_pp5f7iI.jalview2015-04-17 19:13 3.0KJalview annotation file for alignment
[TXT]jp_pp5f7iI.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_pp5f7iI.jnet2015-04-17 19:13 4.0KJnet secondary structure output
[TXT]d1dcea2.name2015-04-17 17:46 0 Job name flag file
[ ]jp_pp5f7iI.concise.pdf2015-04-17 19:13 34KPDF prediction and alignment data
[ ]jp_pp5f7iI.pssm2015-04-17 19:13 23KPSIBLAST PSSM for Jnet
[ ]jp_pp5f7iI.align2015-04-17 19:13 3.9KPSIBLAST alignment in FASTA format
[TXT]jp_pp5f7iI.profile2015-04-17 19:12 18KPSIBLAST profile from alignment
[ ]jp_pp5f7iI.concise2015-04-17 19:13 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_pp5f7iI.concise.fasta2015-04-17 19:13 5.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_pp5f7iI.concise.ps2015-04-17 19:13 608KPrediction: coiled-coil, solvent, alignment
[ ]jp_pp5f7iI.input2015-04-17 17:46 116 Raw input data for analysis
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[ ]jp_pp5f7iI.seq2015-04-17 17:46 123 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.