A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 17:13 | 4.7K | JPred server log file |
| README | 2016-02-15 12:16 | 2.1K | Results file descriptions |
| d1dfup_.name | 2015-04-17 16:32 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_Ubn9A2u.align | 2015-04-17 17:13 | 106K | PSIBLAST alignment in FASTA format |
| jp_Ubn9A2u.als | 2015-04-17 17:13 | 2.4K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_Ubn9A2u.blast.gz | 2015-04-17 17:12 | 859K | Compressed PSIBLAST output file |
| jp_Ubn9A2u.coils.csv | 2015-04-17 17:13 | 594 | COILS output in CSV format |
| jp_Ubn9A2u.coilseq.lupas_14 | 2015-04-17 17:13 | 3.9K | COILS output, window length 14 |
| jp_Ubn9A2u.coilseq.lupas_21 | 2015-04-17 17:13 | 3.9K | COILS output, window length 21 |
| jp_Ubn9A2u.coilseq.lupas_28 | 2015-04-17 17:13 | 3.9K | COILS output, window length 28 |
| jp_Ubn9A2u.concise | 2015-04-17 17:13 | 203K | Prediction: coiled-coil, solvent, alignment |
| jp_Ubn9A2u.concise.blc | 2015-04-17 17:13 | 106K | BLC format prediction and alignment data |
| jp_Ubn9A2u.concise.fasta | 2015-04-17 17:13 | 107K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_Ubn9A2u.concise.pdf | 2015-04-17 17:13 | 725K | PDF prediction and alignment data |
| jp_Ubn9A2u.concise.ps | 2015-04-17 17:13 | 12M | Prediction: coiled-coil, solvent, alignment |
| jp_Ubn9A2u.fasta | 2015-04-17 17:10 | 108 | Input query sequence in FASTA format |
| jp_Ubn9A2u.full_MSA.fasta | 2015-04-17 17:12 | 1.2M | Full MSA before JPred filters in FASTA |
| jp_Ubn9A2u.full_MSA.fasta.noGaps.html | 2015-04-17 17:13 | 646K | Full MSA before JPred filters in FASTA |
| jp_Ubn9A2u.full_MSA.fasta.withGaps.html | 2015-04-17 17:13 | 6.1M | Full MSA before JPred filters in FASTA |
| jp_Ubn9A2u.hmm | 2015-04-17 17:13 | 18K | HHMer2 profile of the alignment |
| jp_Ubn9A2u.html | 2015-04-17 17:13 | 298K | HTML prediction and alignment data |
| jp_Ubn9A2u.input | 2015-04-17 16:32 | 101 | Raw input data for analysis |
| jp_Ubn9A2u.jalview | 2015-04-17 17:13 | 2.7K | Jalview annotation file for alignment |
| jp_Ubn9A2u.jnet | 2015-04-17 17:13 | 3.5K | Jnet secondary structure output |
| jp_Ubn9A2u.profile | 2015-04-17 17:11 | 15K | PSIBLAST profile from alignment |
| jp_Ubn9A2u.pssm | 2015-04-17 17:13 | 20K | PSIBLAST PSSM for Jnet |
| jp_Ubn9A2u.results.html | 2016-02-15 12:16 | 48K | JPred results page |
| jp_Ubn9A2u.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_Ubn9A2u.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_Ubn9A2u.seq | 2015-04-17 16:32 | 108 | Sequence data file |
| jp_Ubn9A2u.simple.html | 2015-04-17 17:13 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_Ubn9A2u.svg.html) | jp_Ubn9A2u.svg.html | 2015-04-17 17:13 | 40K | Jalview SVG summary of results |
| jp_Ubn9A2u.tar.gz | 2015-04-17 17:13 | 2.4M | Archive containing complete results |
