JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:14 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1dl5a2.name2015-04-17 16:32 0 Job name flag file
[ ]jp_UQkYMoO.align2015-04-17 17:14 236 PSIBLAST alignment in FASTA format
[TXT]jp_UQkYMoO.als2015-04-17 17:14 2.4KAlscript command file for PS/PDF output
[ ]jp_UQkYMoO.blast.gz2015-04-17 17:14 1.7KCompressed PSIBLAST output file
[TXT]jp_UQkYMoO.coils.csv2015-04-17 17:14 654 COILS output in CSV format
[ ]jp_UQkYMoO.coilseq.lupas_142015-04-17 17:14 4.4KCOILS output, window length 14
[ ]jp_UQkYMoO.coilseq.lupas_212015-04-17 17:14 4.4KCOILS output, window length 21
[ ]jp_UQkYMoO.coilseq.lupas_282015-04-17 17:14 4.4KCOILS output, window length 28
[ ]jp_UQkYMoO.concise2015-04-17 17:14 5.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_UQkYMoO.concise.blc2015-04-17 17:14 1.8KBLC format prediction and alignment data
[ ]jp_UQkYMoO.concise.fasta2015-04-17 17:14 1.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_UQkYMoO.concise.pdf2015-04-17 17:14 13KPDF prediction and alignment data
[ ]jp_UQkYMoO.concise.ps2015-04-17 17:14 214KPrediction: coiled-coil, solvent, alignment
[ ]jp_UQkYMoO.fasta2015-04-17 17:10 118 Input query sequence in FASTA format
[ ]jp_UQkYMoO.full_MSA.fasta2015-04-17 17:14 359 Full MSA before JPred filters in FASTA
[TXT]jp_UQkYMoO.full_MSA.fasta.noGaps.html2015-04-17 17:14 756 Full MSA before JPred filters in FASTA
[TXT]jp_UQkYMoO.full_MSA.fasta.withGaps.html2015-04-17 17:14 756 Full MSA before JPred filters in FASTA
[ ]jp_UQkYMoO.hmm2015-04-17 17:14 20KHHMer2 profile of the alignment
[TXT]jp_UQkYMoO.html2015-04-17 17:14 12KHTML prediction and alignment data
[ ]jp_UQkYMoO.input2015-04-17 16:32 111 Raw input data for analysis
[ ]jp_UQkYMoO.jalview2015-04-17 17:14 2.9KJalview annotation file for alignment
[ ]jp_UQkYMoO.jnet2015-04-17 17:14 3.9KJnet secondary structure output
[TXT]jp_UQkYMoO.profile2015-04-17 17:11 17KPSIBLAST profile from alignment
[ ]jp_UQkYMoO.pssm2015-04-17 17:14 22KPSIBLAST PSSM for Jnet
[TXT]jp_UQkYMoO.results.html2016-02-15 12:16 53KJPred results page
[TXT]jp_UQkYMoO.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_UQkYMoO.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_UQkYMoO.seq2015-04-17 16:32 118 Sequence data file
[TXT]jp_UQkYMoO.simple.html2015-04-17 17:14 1.3KBrief HTML: sequence and prediction only
[TXT]jp_UQkYMoO.svg.html2015-04-17 17:14 45KJalview SVG summary of results
[ ]jp_UQkYMoO.tar.gz2015-04-17 17:14 37KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.