JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:17 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1dzfa2.name2015-04-17 15:56 0 Job name flag file
[ ]jp_DD8MtsE.align2015-04-17 16:17 26KPSIBLAST alignment in FASTA format
[TXT]jp_DD8MtsE.als2015-04-17 16:17 1.9KAlscript command file for PS/PDF output
[ ]jp_DD8MtsE.blast.gz2015-04-17 16:17 148KCompressed PSIBLAST output file
[TXT]jp_DD8MtsE.coils.csv2015-04-17 16:17 462 COILS output in CSV format
[ ]jp_DD8MtsE.coilseq.lupas_142015-04-17 16:17 3.0KCOILS output, window length 14
[ ]jp_DD8MtsE.coilseq.lupas_212015-04-17 16:17 3.0KCOILS output, window length 21
[ ]jp_DD8MtsE.coilseq.lupas_282015-04-17 16:17 3.0KCOILS output, window length 28
[ ]jp_DD8MtsE.concise2015-04-17 16:17 52KPrediction: coiled-coil, solvent, alignment
[ ]jp_DD8MtsE.concise.blc2015-04-17 16:17 27KBLC format prediction and alignment data
[ ]jp_DD8MtsE.concise.fasta2015-04-17 16:17 27KPrediction: coiled-coil, solvent, alignment
[ ]jp_DD8MtsE.concise.pdf2015-04-17 16:17 174KPDF prediction and alignment data
[ ]jp_DD8MtsE.concise.ps2015-04-17 16:17 2.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_DD8MtsE.fasta2015-04-17 16:14 86 Input query sequence in FASTA format
[ ]jp_DD8MtsE.full_MSA.fasta2015-04-17 16:17 169KFull MSA before JPred filters in FASTA
[TXT]jp_DD8MtsE.full_MSA.fasta.noGaps.html2015-04-17 16:17 136KFull MSA before JPred filters in FASTA
[TXT]jp_DD8MtsE.full_MSA.fasta.withGaps.html2015-04-17 16:17 769KFull MSA before JPred filters in FASTA
[ ]jp_DD8MtsE.hmm2015-04-17 16:17 14KHHMer2 profile of the alignment
[TXT]jp_DD8MtsE.html2015-04-17 16:17 90KHTML prediction and alignment data
[ ]jp_DD8MtsE.input2015-04-17 15:56 79 Raw input data for analysis
[ ]jp_DD8MtsE.jalview2015-04-17 16:17 2.2KJalview annotation file for alignment
[ ]jp_DD8MtsE.jnet2015-04-17 16:17 2.7KJnet secondary structure output
[TXT]jp_DD8MtsE.profile2015-04-17 16:16 12KPSIBLAST profile from alignment
[ ]jp_DD8MtsE.pssm2015-04-17 16:17 15KPSIBLAST PSSM for Jnet
[TXT]jp_DD8MtsE.results.html2016-02-15 12:16 39KJPred results page
[TXT]jp_DD8MtsE.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_DD8MtsE.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_DD8MtsE.seq2015-04-17 15:56 86 Sequence data file
[TXT]jp_DD8MtsE.simple.html2015-04-17 16:17 1.1KBrief HTML: sequence and prediction only
[TXT]jp_DD8MtsE.svg.html2015-04-17 16:17 31KJalview SVG summary of results
[ ]jp_DD8MtsE.tar.gz2015-04-17 16:17 452KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.