A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:02 | 4.7K | JPred server log file |
| README | 2016-02-15 12:16 | 2.1K | Results file descriptions |
| d1egwa_.name | 2015-04-17 17:10 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_9nZxnMk.align | 2015-04-17 20:01 | 38K | PSIBLAST alignment in FASTA format |
| jp_9nZxnMk.als | 2015-04-17 20:01 | 2.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_9nZxnMk.blast.gz | 2015-04-17 20:01 | 1.4M | Compressed PSIBLAST output file |
| jp_9nZxnMk.coils.csv | 2015-04-17 20:01 | 456 | COILS output in CSV format |
| jp_9nZxnMk.coilseq.lupas_14 | 2015-04-17 20:01 | 3.0K | COILS output, window length 14 |
| jp_9nZxnMk.coilseq.lupas_21 | 2015-04-17 20:01 | 3.0K | COILS output, window length 21 |
| jp_9nZxnMk.coilseq.lupas_28 | 2015-04-17 20:01 | 3.0K | COILS output, window length 28 |
| jp_9nZxnMk.concise | 2015-04-17 20:01 | 74K | Prediction: coiled-coil, solvent, alignment |
| jp_9nZxnMk.concise.blc | 2015-04-17 20:01 | 38K | BLC format prediction and alignment data |
| jp_9nZxnMk.concise.fasta | 2015-04-17 20:01 | 38K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_9nZxnMk.concise.pdf | 2015-04-17 20:01 | 217K | PDF prediction and alignment data |
| jp_9nZxnMk.concise.ps | 2015-04-17 20:01 | 4.0M | Prediction: coiled-coil, solvent, alignment |
| jp_9nZxnMk.fasta | 2015-04-17 18:12 | 84 | Input query sequence in FASTA format |
| jp_9nZxnMk.full_MSA.fasta | 2015-04-17 20:01 | 2.5M | Full MSA before JPred filters in FASTA |
| jp_9nZxnMk.full_MSA.fasta.noGaps.html | 2015-04-17 20:01 | 1.0M | Full MSA before JPred filters in FASTA |
| jp_9nZxnMk.full_MSA.fasta.withGaps.html | 2015-04-17 20:01 | 9.7M | Full MSA before JPred filters in FASTA |
| jp_9nZxnMk.hmm | 2015-04-17 20:01 | 13K | HHMer2 profile of the alignment |
| jp_9nZxnMk.html | 2015-04-17 20:01 | 129K | HTML prediction and alignment data |
| jp_9nZxnMk.input | 2015-04-17 17:10 | 78 | Raw input data for analysis |
| jp_9nZxnMk.jalview | 2015-04-17 20:01 | 2.3K | Jalview annotation file for alignment |
| jp_9nZxnMk.jnet | 2015-04-17 20:01 | 2.7K | Jnet secondary structure output |
| jp_9nZxnMk.profile | 2015-04-17 19:58 | 12K | PSIBLAST profile from alignment |
| jp_9nZxnMk.pssm | 2015-04-17 20:01 | 15K | PSIBLAST PSSM for Jnet |
| jp_9nZxnMk.results.html | 2016-02-15 12:16 | 40K | JPred results page |
| jp_9nZxnMk.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_9nZxnMk.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_9nZxnMk.seq | 2015-04-17 17:10 | 84 | Sequence data file |
| jp_9nZxnMk.simple.html | 2015-04-17 20:01 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_9nZxnMk.svg.html) | jp_9nZxnMk.svg.html | 2015-04-17 20:02 | 31K | Jalview SVG summary of results |
| jp_9nZxnMk.tar.gz | 2015-04-17 20:02 | 2.4M | Archive containing complete results |
