JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:19 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1el6a_.name2015-04-17 19:00 0 Job name flag file
[ ]jp_4cIaNEj.align2015-04-17 21:19 5.8KPSIBLAST alignment in FASTA format
[TXT]jp_4cIaNEj.als2015-04-17 21:19 3.0KAlscript command file for PS/PDF output
[ ]jp_4cIaNEj.blast.gz2015-04-17 21:19 11KCompressed PSIBLAST output file
[TXT]jp_4cIaNEj.coils.csv2015-04-17 21:19 1.2KCOILS output in CSV format
[ ]jp_4cIaNEj.coilseq.lupas_142015-04-17 21:19 8.7KCOILS output, window length 14
[ ]jp_4cIaNEj.coilseq.lupas_212015-04-17 21:19 8.7KCOILS output, window length 21
[ ]jp_4cIaNEj.coilseq.lupas_282015-04-17 21:19 8.7KCOILS output, window length 28
[ ]jp_4cIaNEj.concise2015-04-17 21:19 20KPrediction: coiled-coil, solvent, alignment
[ ]jp_4cIaNEj.concise.blc2015-04-17 21:19 8.9KBLC format prediction and alignment data
[ ]jp_4cIaNEj.concise.fasta2015-04-17 21:19 7.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_4cIaNEj.concise.pdf2015-04-17 21:19 60KPDF prediction and alignment data
[ ]jp_4cIaNEj.concise.ps2015-04-17 21:19 1.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_4cIaNEj.fasta2015-04-17 21:12 223 Input query sequence in FASTA format
[ ]jp_4cIaNEj.full_MSA.fasta2015-04-17 21:19 9.0KFull MSA before JPred filters in FASTA
[TXT]jp_4cIaNEj.full_MSA.fasta.noGaps.html2015-04-17 21:19 11KFull MSA before JPred filters in FASTA
[TXT]jp_4cIaNEj.full_MSA.fasta.withGaps.html2015-04-17 21:19 27KFull MSA before JPred filters in FASTA
[ ]jp_4cIaNEj.hmm2015-04-17 21:19 39KHHMer2 profile of the alignment
[TXT]jp_4cIaNEj.html2015-04-17 21:19 29KHTML prediction and alignment data
[ ]jp_4cIaNEj.input2015-04-17 19:00 215 Raw input data for analysis
[ ]jp_4cIaNEj.jalview2015-04-17 21:19 5.0KJalview annotation file for alignment
[ ]jp_4cIaNEj.jnet2015-04-17 21:19 7.6KJnet secondary structure output
[TXT]jp_4cIaNEj.profile2015-04-17 21:18 33KPSIBLAST profile from alignment
[ ]jp_4cIaNEj.pssm2015-04-17 21:19 45KPSIBLAST PSSM for Jnet
[TXT]jp_4cIaNEj.results.html2016-02-15 12:16 90KJPred results page
[TXT]jp_4cIaNEj.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_4cIaNEj.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_4cIaNEj.seq2015-04-17 19:00 223 Sequence data file
[TXT]jp_4cIaNEj.simple.html2015-04-17 21:19 1.6KBrief HTML: sequence and prediction only
[TXT]jp_4cIaNEj.svg.html2015-04-17 21:19 82KJalview SVG summary of results
[ ]jp_4cIaNEj.tar.gz2015-04-17 21:19 135KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.