JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:27 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1elva2.name2015-04-17 15:09 0 Job name flag file
[ ]jp_IVqxPDA.align2015-04-17 15:26 63KPSIBLAST alignment in FASTA format
[TXT]jp_IVqxPDA.als2015-04-17 15:26 2.0KAlscript command file for PS/PDF output
[ ]jp_IVqxPDA.blast.gz2015-04-17 15:24 3.5MCompressed PSIBLAST output file
[TXT]jp_IVqxPDA.coils.csv2015-04-17 15:26 426 COILS output in CSV format
[ ]jp_IVqxPDA.coilseq.lupas_142015-04-17 15:26 2.8KCOILS output, window length 14
[ ]jp_IVqxPDA.coilseq.lupas_212015-04-17 15:26 2.8KCOILS output, window length 21
[ ]jp_IVqxPDA.coilseq.lupas_282015-04-17 15:26 2.8KCOILS output, window length 28
[ ]jp_IVqxPDA.concise2015-04-17 15:26 120KPrediction: coiled-coil, solvent, alignment
[ ]jp_IVqxPDA.concise.blc2015-04-17 15:26 64KBLC format prediction and alignment data
[ ]jp_IVqxPDA.concise.fasta2015-04-17 15:26 64KPrediction: coiled-coil, solvent, alignment
[ ]jp_IVqxPDA.concise.pdf2015-04-17 15:26 371KPDF prediction and alignment data
[ ]jp_IVqxPDA.concise.ps2015-04-17 15:26 6.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_IVqxPDA.fasta2015-04-17 15:09 79 Input query sequence in FASTA format
[ ]jp_IVqxPDA.full_MSA.fasta2015-04-17 15:25 15MFull MSA before JPred filters in FASTA
[TXT]jp_IVqxPDA.full_MSA.fasta.noGaps.html2015-04-17 15:27 3.8MFull MSA before JPred filters in FASTA
[TXT]jp_IVqxPDA.full_MSA.fasta.withGaps.html2015-04-17 15:27 46MFull MSA before JPred filters in FASTA
[ ]jp_IVqxPDA.hmm2015-04-17 15:26 12KHHMer2 profile of the alignment
[TXT]jp_IVqxPDA.html2015-04-17 15:26 212KHTML prediction and alignment data
[ ]jp_IVqxPDA.input2015-04-17 15:09 73 Raw input data for analysis
[ ]jp_IVqxPDA.jalview2015-04-17 15:26 2.1KJalview annotation file for alignment
[ ]jp_IVqxPDA.jnet2015-04-17 15:26 2.5KJnet secondary structure output
[TXT]jp_IVqxPDA.profile2015-04-17 15:23 11KPSIBLAST profile from alignment
[ ]jp_IVqxPDA.pssm2015-04-17 15:26 14KPSIBLAST PSSM for Jnet
[TXT]jp_IVqxPDA.results.html2016-02-15 12:16 37KJPred results page
[TXT]jp_IVqxPDA.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_IVqxPDA.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_IVqxPDA.seq2015-04-17 15:09 79 Sequence data file
[TXT]jp_IVqxPDA.simple.html2015-04-17 15:26 1.1KBrief HTML: sequence and prediction only
[TXT]jp_IVqxPDA.svg.html2015-04-17 15:27 29KJalview SVG summary of results
[ ]jp_IVqxPDA.tar.gz2015-04-17 15:27 8.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.