JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:22 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1f00i1.name2015-04-17 15:16 0 Job name flag file
[ ]jp_FnS5u_7.align2015-04-17 15:22 92KPSIBLAST alignment in FASTA format
[TXT]jp_FnS5u_7.als2015-04-17 15:22 2.4KAlscript command file for PS/PDF output
[ ]jp_FnS5u_7.blast.gz2015-04-17 15:21 430KCompressed PSIBLAST output file
[TXT]jp_FnS5u_7.coils.csv2015-04-17 15:22 600 COILS output in CSV format
[ ]jp_FnS5u_7.coilseq.lupas_142015-04-17 15:22 4.0KCOILS output, window length 14
[ ]jp_FnS5u_7.coilseq.lupas_212015-04-17 15:22 4.0KCOILS output, window length 21
[ ]jp_FnS5u_7.coilseq.lupas_282015-04-17 15:22 4.0KCOILS output, window length 28
[ ]jp_FnS5u_7.concise2015-04-17 15:22 177KPrediction: coiled-coil, solvent, alignment
[ ]jp_FnS5u_7.concise.blc2015-04-17 15:22 92KBLC format prediction and alignment data
[ ]jp_FnS5u_7.concise.fasta2015-04-17 15:22 94KPrediction: coiled-coil, solvent, alignment
[ ]jp_FnS5u_7.concise.pdf2015-04-17 15:22 510KPDF prediction and alignment data
[ ]jp_FnS5u_7.concise.ps2015-04-17 15:22 10MPrediction: coiled-coil, solvent, alignment
[ ]jp_FnS5u_7.fasta2015-04-17 15:16 109 Input query sequence in FASTA format
[ ]jp_FnS5u_7.full_MSA.fasta2015-04-17 15:21 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_FnS5u_7.full_MSA.fasta.noGaps.html2015-04-17 15:22 554KFull MSA before JPred filters in FASTA
[TXT]jp_FnS5u_7.full_MSA.fasta.withGaps.html2015-04-17 15:22 6.7MFull MSA before JPred filters in FASTA
[ ]jp_FnS5u_7.hmm2015-04-17 15:22 18KHHMer2 profile of the alignment
[TXT]jp_FnS5u_7.html2015-04-17 15:22 258KHTML prediction and alignment data
[ ]jp_FnS5u_7.input2015-04-17 15:16 102 Raw input data for analysis
[ ]jp_FnS5u_7.jalview2015-04-17 15:22 2.7KJalview annotation file for alignment
[ ]jp_FnS5u_7.jnet2015-04-17 15:22 3.5KJnet secondary structure output
[TXT]jp_FnS5u_7.profile2015-04-17 15:20 16KPSIBLAST profile from alignment
[ ]jp_FnS5u_7.pssm2015-04-17 15:22 20KPSIBLAST PSSM for Jnet
[TXT]jp_FnS5u_7.results.html2016-02-15 12:16 47KJPred results page
[TXT]jp_FnS5u_7.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_FnS5u_7.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_FnS5u_7.seq2015-04-17 15:16 109 Sequence data file
[TXT]jp_FnS5u_7.simple.html2015-04-17 15:22 1.2KBrief HTML: sequence and prediction only
[TXT]jp_FnS5u_7.svg.html2015-04-17 15:22 39KJalview SVG summary of results
[ ]jp_FnS5u_7.tar.gz2015-04-17 15:22 1.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.