JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:14 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1f35a_.name2015-04-17 16:33 0 Job name flag file
[ ]jp_gGxbFLb.align2015-04-17 17:14 3.0KPSIBLAST alignment in FASTA format
[TXT]jp_gGxbFLb.als2015-04-17 17:14 2.9KAlscript command file for PS/PDF output
[ ]jp_gGxbFLb.blast.gz2015-04-17 17:14 8.6KCompressed PSIBLAST output file
[TXT]jp_gGxbFLb.coils.csv2015-04-17 17:14 1.0KCOILS output in CSV format
[ ]jp_gGxbFLb.coilseq.lupas_142015-04-17 17:14 6.8KCOILS output, window length 14
[ ]jp_gGxbFLb.coilseq.lupas_212015-04-17 17:14 6.8KCOILS output, window length 21
[ ]jp_gGxbFLb.coilseq.lupas_282015-04-17 17:14 6.8KCOILS output, window length 28
[ ]jp_gGxbFLb.concise2015-04-17 17:14 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_gGxbFLb.concise.blc2015-04-17 17:14 5.5KBLC format prediction and alignment data
[ ]jp_gGxbFLb.concise.fasta2015-04-17 17:14 4.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_gGxbFLb.concise.pdf2015-04-17 17:14 37KPDF prediction and alignment data
[ ]jp_gGxbFLb.concise.ps2015-04-17 17:14 647KPrediction: coiled-coil, solvent, alignment
[ ]jp_gGxbFLb.fasta2015-04-17 17:10 177 Input query sequence in FASTA format
[ ]jp_gGxbFLb.full_MSA.fasta2015-04-17 17:14 10KFull MSA before JPred filters in FASTA
[TXT]jp_gGxbFLb.full_MSA.fasta.noGaps.html2015-04-17 17:14 15KFull MSA before JPred filters in FASTA
[TXT]jp_gGxbFLb.full_MSA.fasta.withGaps.html2015-04-17 17:14 27KFull MSA before JPred filters in FASTA
[ ]jp_gGxbFLb.hmm2015-04-17 17:14 30KHHMer2 profile of the alignment
[TXT]jp_gGxbFLb.html2015-04-17 17:14 22KHTML prediction and alignment data
[ ]jp_gGxbFLb.input2015-04-17 16:33 169 Raw input data for analysis
[ ]jp_gGxbFLb.jalview2015-04-17 17:14 4.1KJalview annotation file for alignment
[ ]jp_gGxbFLb.jnet2015-04-17 17:14 6.0KJnet secondary structure output
[TXT]jp_gGxbFLb.profile2015-04-17 17:13 26KPSIBLAST profile from alignment
[ ]jp_gGxbFLb.pssm2015-04-17 17:14 35KPSIBLAST PSSM for Jnet
[TXT]jp_gGxbFLb.results.html2016-02-15 12:16 75KJPred results page
[TXT]jp_gGxbFLb.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_gGxbFLb.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_gGxbFLb.seq2015-04-17 16:33 177 Sequence data file
[TXT]jp_gGxbFLb.simple.html2015-04-17 17:14 1.5KBrief HTML: sequence and prediction only
[TXT]jp_gGxbFLb.svg.html2015-04-17 17:14 67KJalview SVG summary of results
[ ]jp_gGxbFLb.tar.gz2015-04-17 17:14 89KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.