JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:21 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1f60b_.name2015-04-17 17:47 0 Job name flag file
[ ]jp_GwPP9_S.align2015-04-17 19:21 27KPSIBLAST alignment in FASTA format
[TXT]jp_GwPP9_S.als2015-04-17 19:21 2.3KAlscript command file for PS/PDF output
[ ]jp_GwPP9_S.blast.gz2015-04-17 19:21 255KCompressed PSIBLAST output file
[TXT]jp_GwPP9_S.coils.csv2015-04-17 19:21 570 COILS output in CSV format
[ ]jp_GwPP9_S.coilseq.lupas_142015-04-17 19:21 3.8KCOILS output, window length 14
[ ]jp_GwPP9_S.coilseq.lupas_212015-04-17 19:21 3.8KCOILS output, window length 21
[ ]jp_GwPP9_S.coilseq.lupas_282015-04-17 19:21 3.8KCOILS output, window length 28
[ ]jp_GwPP9_S.concise2015-04-17 19:21 54KPrediction: coiled-coil, solvent, alignment
[ ]jp_GwPP9_S.concise.blc2015-04-17 19:21 27KBLC format prediction and alignment data
[ ]jp_GwPP9_S.concise.fasta2015-04-17 19:21 28KPrediction: coiled-coil, solvent, alignment
[ ]jp_GwPP9_S.concise.pdf2015-04-17 19:21 175KPDF prediction and alignment data
[ ]jp_GwPP9_S.concise.ps2015-04-17 19:21 3.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_GwPP9_S.fasta2015-04-17 19:14 104 Input query sequence in FASTA format
[ ]jp_GwPP9_S.full_MSA.fasta2015-04-17 19:21 356KFull MSA before JPred filters in FASTA
[TXT]jp_GwPP9_S.full_MSA.fasta.noGaps.html2015-04-17 19:21 192KFull MSA before JPred filters in FASTA
[TXT]jp_GwPP9_S.full_MSA.fasta.withGaps.html2015-04-17 19:21 1.3MFull MSA before JPred filters in FASTA
[ ]jp_GwPP9_S.hmm2015-04-17 19:21 17KHHMer2 profile of the alignment
[TXT]jp_GwPP9_S.html2015-04-17 19:21 84KHTML prediction and alignment data
[ ]jp_GwPP9_S.input2015-04-17 17:47 97 Raw input data for analysis
[ ]jp_GwPP9_S.jalview2015-04-17 19:21 2.6KJalview annotation file for alignment
[ ]jp_GwPP9_S.jnet2015-04-17 19:21 3.4KJnet secondary structure output
[TXT]jp_GwPP9_S.profile2015-04-17 19:19 15KPSIBLAST profile from alignment
[ ]jp_GwPP9_S.pssm2015-04-17 19:21 19KPSIBLAST PSSM for Jnet
[TXT]jp_GwPP9_S.results.html2016-02-15 12:16 47KJPred results page
[TXT]jp_GwPP9_S.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_GwPP9_S.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_GwPP9_S.seq2015-04-17 17:47 104 Sequence data file
[TXT]jp_GwPP9_S.simple.html2015-04-17 19:21 1.2KBrief HTML: sequence and prediction only
[TXT]jp_GwPP9_S.svg.html2015-04-17 19:21 39KJalview SVG summary of results
[ ]jp_GwPP9_S.tar.gz2015-04-17 19:21 579KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.