JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:23 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1fcya_.name2015-04-17 16:33 0 Job name flag file
[ ]jp_VC0qyH5.align2015-04-17 17:22 139KPSIBLAST alignment in FASTA format
[TXT]jp_VC0qyH5.als2015-04-17 17:22 2.7KAlscript command file for PS/PDF output
[ ]jp_VC0qyH5.blast.gz2015-04-17 17:20 8.3MCompressed PSIBLAST output file
[TXT]jp_VC0qyH5.coils.csv2015-04-17 17:22 1.4KCOILS output in CSV format
[ ]jp_VC0qyH5.coilseq.lupas_142015-04-17 17:22 9.9KCOILS output, window length 14
[ ]jp_VC0qyH5.coilseq.lupas_212015-04-17 17:22 9.9KCOILS output, window length 21
[ ]jp_VC0qyH5.coilseq.lupas_282015-04-17 17:22 9.9KCOILS output, window length 28
[ ]jp_VC0qyH5.concise2015-04-17 17:22 278KPrediction: coiled-coil, solvent, alignment
[ ]jp_VC0qyH5.concise.blc2015-04-17 17:22 140KBLC format prediction and alignment data
[ ]jp_VC0qyH5.concise.fasta2015-04-17 17:22 141KPrediction: coiled-coil, solvent, alignment
[ ]jp_VC0qyH5.concise.pdf2015-04-17 17:22 1.0MPDF prediction and alignment data
[ ]jp_VC0qyH5.concise.ps2015-04-17 17:22 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_VC0qyH5.fasta2015-04-17 17:13 252 Input query sequence in FASTA format
[ ]jp_VC0qyH5.full_MSA.fasta2015-04-17 17:20 15MFull MSA before JPred filters in FASTA
[TXT]jp_VC0qyH5.full_MSA.fasta.noGaps.html2015-04-17 17:22 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_VC0qyH5.full_MSA.fasta.withGaps.html2015-04-17 17:22 37MFull MSA before JPred filters in FASTA
[ ]jp_VC0qyH5.hmm2015-04-17 17:22 44KHHMer2 profile of the alignment
[TXT]jp_VC0qyH5.html2015-04-17 17:22 267KHTML prediction and alignment data
[ ]jp_VC0qyH5.input2015-04-17 16:33 243 Raw input data for analysis
[ ]jp_VC0qyH5.jalview2015-04-17 17:22 5.6KJalview annotation file for alignment
[ ]jp_VC0qyH5.jnet2015-04-17 17:22 8.6KJnet secondary structure output
[TXT]jp_VC0qyH5.profile2015-04-17 17:17 38KPSIBLAST profile from alignment
[ ]jp_VC0qyH5.pssm2015-04-17 17:22 51KPSIBLAST PSSM for Jnet
[TXT]jp_VC0qyH5.results.html2016-02-15 12:16 102KJPred results page
[TXT]jp_VC0qyH5.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_VC0qyH5.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_VC0qyH5.seq2015-04-17 16:33 252 Sequence data file
[TXT]jp_VC0qyH5.simple.html2015-04-17 17:22 1.6KBrief HTML: sequence and prediction only
[TXT]jp_VC0qyH5.svg.html2015-04-17 17:23 94KJalview SVG summary of results
[ ]jp_VC0qyH5.tar.gz2015-04-17 17:23 13MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.