JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:17 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1fm0d_.name2015-04-17 16:33 0 Job name flag file
[ ]jp_z89cqGF.align2015-04-17 17:17 119KPSIBLAST alignment in FASTA format
[TXT]jp_z89cqGF.als2015-04-17 17:17 2.2KAlscript command file for PS/PDF output
[ ]jp_z89cqGF.blast.gz2015-04-17 17:16 830KCompressed PSIBLAST output file
[TXT]jp_z89cqGF.coils.csv2015-04-17 17:17 516 COILS output in CSV format
[ ]jp_z89cqGF.coilseq.lupas_142015-04-17 17:17 3.4KCOILS output, window length 14
[ ]jp_z89cqGF.coilseq.lupas_212015-04-17 17:17 3.4KCOILS output, window length 21
[ ]jp_z89cqGF.coilseq.lupas_282015-04-17 17:17 3.4KCOILS output, window length 28
[ ]jp_z89cqGF.concise2015-04-17 17:17 226KPrediction: coiled-coil, solvent, alignment
[ ]jp_z89cqGF.concise.blc2015-04-17 17:17 118KBLC format prediction and alignment data
[ ]jp_z89cqGF.concise.fasta2015-04-17 17:17 120KPrediction: coiled-coil, solvent, alignment
[ ]jp_z89cqGF.concise.pdf2015-04-17 17:17 790KPDF prediction and alignment data
[ ]jp_z89cqGF.concise.ps2015-04-17 17:17 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_z89cqGF.fasta2015-04-17 17:13 95 Input query sequence in FASTA format
[ ]jp_z89cqGF.full_MSA.fasta2015-04-17 17:16 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_z89cqGF.full_MSA.fasta.noGaps.html2015-04-17 17:17 627KFull MSA before JPred filters in FASTA
[TXT]jp_z89cqGF.full_MSA.fasta.withGaps.html2015-04-17 17:17 7.0MFull MSA before JPred filters in FASTA
[ ]jp_z89cqGF.hmm2015-04-17 17:17 15KHHMer2 profile of the alignment
[TXT]jp_z89cqGF.html2015-04-17 17:17 358KHTML prediction and alignment data
[ ]jp_z89cqGF.input2015-04-17 16:33 88 Raw input data for analysis
[ ]jp_z89cqGF.jalview2015-04-17 17:17 2.4KJalview annotation file for alignment
[ ]jp_z89cqGF.jnet2015-04-17 17:17 3.0KJnet secondary structure output
[TXT]jp_z89cqGF.profile2015-04-17 17:15 13KPSIBLAST profile from alignment
[ ]jp_z89cqGF.pssm2015-04-17 17:17 17KPSIBLAST PSSM for Jnet
[TXT]jp_z89cqGF.results.html2016-02-15 12:16 43KJPred results page
[TXT]jp_z89cqGF.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_z89cqGF.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_z89cqGF.seq2015-04-17 16:33 95 Sequence data file
[TXT]jp_z89cqGF.simple.html2015-04-17 17:17 1.2KBrief HTML: sequence and prediction only
[TXT]jp_z89cqGF.svg.html2015-04-17 17:17 35KJalview SVG summary of results
[ ]jp_z89cqGF.tar.gz2015-04-17 17:17 2.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.