JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:16 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1fn9a_.name2015-04-17 19:00 0 Job name flag file
[ ]jp_FJHl2xX.align2015-04-17 21:16 4.5KPSIBLAST alignment in FASTA format
[TXT]jp_FJHl2xX.als2015-04-17 21:16 4.4KAlscript command file for PS/PDF output
[ ]jp_FJHl2xX.blast.gz2015-04-17 21:16 9.5KCompressed PSIBLAST output file
[TXT]jp_FJHl2xX.coils.csv2015-04-17 21:16 2.2KCOILS output in CSV format
[ ]jp_FJHl2xX.coilseq.lupas_142015-04-17 21:16 15KCOILS output, window length 14
[ ]jp_FJHl2xX.coilseq.lupas_212015-04-17 21:16 15KCOILS output, window length 21
[ ]jp_FJHl2xX.coilseq.lupas_282015-04-17 21:16 15KCOILS output, window length 28
[ ]jp_FJHl2xX.concise2015-04-17 21:16 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_FJHl2xX.concise.blc2015-04-17 21:16 9.9KBLC format prediction and alignment data
[ ]jp_FJHl2xX.concise.fasta2015-04-17 21:16 8.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_FJHl2xX.concise.pdf2015-04-17 21:16 62KPDF prediction and alignment data
[ ]jp_FJHl2xX.concise.ps2015-04-17 21:16 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_FJHl2xX.fasta2015-04-17 21:12 383 Input query sequence in FASTA format
[ ]jp_FJHl2xX.full_MSA.fasta2015-04-17 21:16 14KFull MSA before JPred filters in FASTA
[TXT]jp_FJHl2xX.full_MSA.fasta.noGaps.html2015-04-17 21:16 12KFull MSA before JPred filters in FASTA
[TXT]jp_FJHl2xX.full_MSA.fasta.withGaps.html2015-04-17 21:16 43KFull MSA before JPred filters in FASTA
[ ]jp_FJHl2xX.hmm2015-04-17 21:16 68KHHMer2 profile of the alignment
[TXT]jp_FJHl2xX.html2015-04-17 21:16 34KHTML prediction and alignment data
[ ]jp_FJHl2xX.input2015-04-17 19:00 372 Raw input data for analysis
[ ]jp_FJHl2xX.jalview2015-04-17 21:16 8.0KJalview annotation file for alignment
[ ]jp_FJHl2xX.jnet2015-04-17 21:16 13KJnet secondary structure output
[TXT]jp_FJHl2xX.profile2015-04-17 21:14 58KPSIBLAST profile from alignment
[ ]jp_FJHl2xX.pssm2015-04-17 21:16 78KPSIBLAST PSSM for Jnet
[TXT]jp_FJHl2xX.results.html2016-02-15 12:16 151KJPred results page
[TXT]jp_FJHl2xX.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_FJHl2xX.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_FJHl2xX.seq2015-04-17 19:00 383 Sequence data file
[TXT]jp_FJHl2xX.simple.html2015-04-17 21:16 2.1KBrief HTML: sequence and prediction only
[TXT]jp_FJHl2xX.svg.html2015-04-17 21:16 143KJalview SVG summary of results
[ ]jp_FJHl2xX.tar.gz2015-04-17 21:16 155KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.