JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:27 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gmua2.name2015-04-17 15:19 0 Job name flag file
[ ]jp_Wy5RWVn.align2015-04-17 16:26 40KPSIBLAST alignment in FASTA format
[TXT]jp_Wy5RWVn.als2015-04-17 16:26 2.1KAlscript command file for PS/PDF output
[ ]jp_Wy5RWVn.blast.gz2015-04-17 16:26 147KCompressed PSIBLAST output file
[TXT]jp_Wy5RWVn.coils.csv2015-04-17 16:26 438 COILS output in CSV format
[ ]jp_Wy5RWVn.coilseq.lupas_142015-04-17 16:26 2.9KCOILS output, window length 14
[ ]jp_Wy5RWVn.coilseq.lupas_212015-04-17 16:26 2.9KCOILS output, window length 21
[ ]jp_Wy5RWVn.coilseq.lupas_282015-04-17 16:26 2.9KCOILS output, window length 28
[ ]jp_Wy5RWVn.concise2015-04-17 16:26 78KPrediction: coiled-coil, solvent, alignment
[ ]jp_Wy5RWVn.concise.blc2015-04-17 16:26 41KBLC format prediction and alignment data
[ ]jp_Wy5RWVn.concise.fasta2015-04-17 16:26 41KPrediction: coiled-coil, solvent, alignment
[ ]jp_Wy5RWVn.concise.pdf2015-04-17 16:26 264KPDF prediction and alignment data
[ ]jp_Wy5RWVn.concise.ps2015-04-17 16:26 4.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_Wy5RWVn.fasta2015-04-17 15:19 81 Input query sequence in FASTA format
[ ]jp_Wy5RWVn.full_MSA.fasta2015-04-17 16:26 201KFull MSA before JPred filters in FASTA
[TXT]jp_Wy5RWVn.full_MSA.fasta.noGaps.html2015-04-17 16:26 171KFull MSA before JPred filters in FASTA
[TXT]jp_Wy5RWVn.full_MSA.fasta.withGaps.html2015-04-17 16:26 775KFull MSA before JPred filters in FASTA
[ ]jp_Wy5RWVn.hmm2015-04-17 16:26 13KHHMer2 profile of the alignment
[TXT]jp_Wy5RWVn.html2015-04-17 16:26 139KHTML prediction and alignment data
[ ]jp_Wy5RWVn.input2015-04-17 15:19 75 Raw input data for analysis
[ ]jp_Wy5RWVn.jalview2015-04-17 16:26 2.2KJalview annotation file for alignment
[ ]jp_Wy5RWVn.jnet2015-04-17 16:26 2.6KJnet secondary structure output
[TXT]jp_Wy5RWVn.profile2015-04-17 16:15 11KPSIBLAST profile from alignment
[ ]jp_Wy5RWVn.pssm2015-04-17 16:26 15KPSIBLAST PSSM for Jnet
[TXT]jp_Wy5RWVn.results.html2016-02-15 12:17 38KJPred results page
[TXT]jp_Wy5RWVn.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Wy5RWVn.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Wy5RWVn.seq2015-04-17 15:19 81 Sequence data file
[TXT]jp_Wy5RWVn.simple.html2015-04-17 16:26 1.1KBrief HTML: sequence and prediction only
[TXT]jp_Wy5RWVn.svg.html2015-04-17 16:26 30KJalview SVG summary of results
[ ]jp_Wy5RWVn.tar.gz2015-04-17 16:27 580KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.