JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:15 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gqea_.name2015-04-17 15:58 0 Job name flag file
[ ]jp_uc4wOnr.align2015-04-17 17:14 294KPSIBLAST alignment in FASTA format
[TXT]jp_uc4wOnr.als2015-04-17 17:14 4.4KAlscript command file for PS/PDF output
[ ]jp_uc4wOnr.blast.gz2015-04-17 17:00 9.8MCompressed PSIBLAST output file
[TXT]jp_uc4wOnr.coils.csv2015-04-17 17:14 2.2KCOILS output in CSV format
[ ]jp_uc4wOnr.coilseq.lupas_142015-04-17 17:14 15KCOILS output, window length 14
[ ]jp_uc4wOnr.coilseq.lupas_212015-04-17 17:14 15KCOILS output, window length 21
[ ]jp_uc4wOnr.coilseq.lupas_282015-04-17 17:14 15KCOILS output, window length 28
[ ]jp_uc4wOnr.concise2015-04-17 17:14 587KPrediction: coiled-coil, solvent, alignment
[ ]jp_uc4wOnr.concise.blc2015-04-17 17:14 295KBLC format prediction and alignment data
[ ]jp_uc4wOnr.concise.fasta2015-04-17 17:14 298KPrediction: coiled-coil, solvent, alignment
[ ]jp_uc4wOnr.concise.pdf2015-04-17 17:15 1.9MPDF prediction and alignment data
[ ]jp_uc4wOnr.concise.ps2015-04-17 17:14 37MPrediction: coiled-coil, solvent, alignment
[ ]jp_uc4wOnr.fasta2015-04-17 16:16 380 Input query sequence in FASTA format
[ ]jp_uc4wOnr.full_MSA.fasta2015-04-17 17:13 15MFull MSA before JPred filters in FASTA
[TXT]jp_uc4wOnr.full_MSA.fasta.noGaps.html2015-04-17 17:15 3.1MFull MSA before JPred filters in FASTA
[TXT]jp_uc4wOnr.full_MSA.fasta.withGaps.html2015-04-17 17:15 60MFull MSA before JPred filters in FASTA
[ ]jp_uc4wOnr.hmm2015-04-17 17:14 68KHHMer2 profile of the alignment
[TXT]jp_uc4wOnr.html2015-04-17 17:14 479KHTML prediction and alignment data
[ ]jp_uc4wOnr.input2015-04-17 15:58 369 Raw input data for analysis
[ ]jp_uc4wOnr.jalview2015-04-17 17:14 8.2KJalview annotation file for alignment
[ ]jp_uc4wOnr.jnet2015-04-17 17:14 13KJnet secondary structure output
[TXT]jp_uc4wOnr.profile2015-04-17 16:43 58KPSIBLAST profile from alignment
[ ]jp_uc4wOnr.pssm2015-04-17 17:14 78KPSIBLAST PSSM for Jnet
[TXT]jp_uc4wOnr.results.html2016-02-15 12:17 150KJPred results page
[TXT]jp_uc4wOnr.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_uc4wOnr.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_uc4wOnr.seq2015-04-17 15:58 380 Sequence data file
[TXT]jp_uc4wOnr.simple.html2015-04-17 17:14 2.1KBrief HTML: sequence and prediction only
[TXT]jp_uc4wOnr.svg.html2015-04-17 17:15 142KJalview SVG summary of results
[ ]jp_uc4wOnr.tar.gz2015-04-17 17:15 18MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.