JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:39 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gvna_.name2015-04-17 15:32 0 Job name flag file
[ ]jp_j_BE6QN.align2015-04-17 15:39 1.4KPSIBLAST alignment in FASTA format
[TXT]jp_j_BE6QN.als2015-04-17 15:39 1.6KAlscript command file for PS/PDF output
[ ]jp_j_BE6QN.blast.gz2015-04-17 15:39 3.2KCompressed PSIBLAST output file
[TXT]jp_j_BE6QN.coils.csv2015-04-17 15:39 552 COILS output in CSV format
[ ]jp_j_BE6QN.coilseq.lupas_142015-04-17 15:39 3.7KCOILS output, window length 14
[ ]jp_j_BE6QN.coilseq.lupas_212015-04-17 15:39 3.7KCOILS output, window length 21
[ ]jp_j_BE6QN.coilseq.lupas_282015-04-17 15:39 3.7KCOILS output, window length 28
[ ]jp_j_BE6QN.concise2015-04-17 15:39 6.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_j_BE6QN.concise.blc2015-04-17 15:39 2.8KBLC format prediction and alignment data
[ ]jp_j_BE6QN.concise.fasta2015-04-17 15:39 2.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_j_BE6QN.concise.pdf2015-04-17 15:39 20KPDF prediction and alignment data
[ ]jp_j_BE6QN.concise.ps2015-04-17 15:39 324KPrediction: coiled-coil, solvent, alignment
[ ]jp_j_BE6QN.fasta2015-04-17 15:37 101 Input query sequence in FASTA format
[ ]jp_j_BE6QN.full_MSA.fasta2015-04-17 15:39 2.0KFull MSA before JPred filters in FASTA
[TXT]jp_j_BE6QN.full_MSA.fasta.noGaps.html2015-04-17 15:39 4.2KFull MSA before JPred filters in FASTA
[TXT]jp_j_BE6QN.full_MSA.fasta.withGaps.html2015-04-17 15:39 4.2KFull MSA before JPred filters in FASTA
[ ]jp_j_BE6QN.hmm2015-04-17 15:39 16KHHMer2 profile of the alignment
[TXT]jp_j_BE6QN.html2015-04-17 15:39 15KHTML prediction and alignment data
[ ]jp_j_BE6QN.input2015-04-17 15:32 94 Raw input data for analysis
[ ]jp_j_BE6QN.jalview2015-04-17 15:39 2.6KJalview annotation file for alignment
[ ]jp_j_BE6QN.jnet2015-04-17 15:39 3.3KJnet secondary structure output
[TXT]jp_j_BE6QN.profile2015-04-17 15:38 14KPSIBLAST profile from alignment
[ ]jp_j_BE6QN.pssm2015-04-17 15:39 19KPSIBLAST PSSM for Jnet
[TXT]jp_j_BE6QN.results.html2016-02-15 12:17 44KJPred results page
[TXT]jp_j_BE6QN.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_j_BE6QN.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_j_BE6QN.seq2015-04-17 15:32 101 Sequence data file
[TXT]jp_j_BE6QN.simple.html2015-04-17 15:39 1.1KBrief HTML: sequence and prediction only
[TXT]jp_j_BE6QN.svg.html2015-04-17 15:39 36KJalview SVG summary of results
[ ]jp_j_BE6QN.tar.gz2015-04-17 15:39 47KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.