JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:34 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1h16a_.name2015-04-17 17:49 0 Job name flag file
[ ]jp_kMxlbgG.align2015-04-17 19:32 379KPSIBLAST alignment in FASTA format
[TXT]jp_kMxlbgG.als2015-04-17 19:32 7.7KAlscript command file for PS/PDF output
[ ]jp_kMxlbgG.blast.gz2015-04-17 19:30 7.2MCompressed PSIBLAST output file
[TXT]jp_kMxlbgG.coils.csv2015-04-17 19:32 4.5KCOILS output in CSV format
[ ]jp_kMxlbgG.coilseq.lupas_142015-04-17 19:32 32KCOILS output, window length 14
[ ]jp_kMxlbgG.coilseq.lupas_212015-04-17 19:32 32KCOILS output, window length 21
[ ]jp_kMxlbgG.coilseq.lupas_282015-04-17 19:32 32KCOILS output, window length 28
[ ]jp_kMxlbgG.concise2015-04-17 19:32 774KPrediction: coiled-coil, solvent, alignment
[ ]jp_kMxlbgG.concise.blc2015-04-17 19:32 385KBLC format prediction and alignment data
[ ]jp_kMxlbgG.concise.fasta2015-04-17 19:32 386KPrediction: coiled-coil, solvent, alignment
[ ]jp_kMxlbgG.concise.pdf2015-04-17 19:34 2.6MPDF prediction and alignment data
[ ]jp_kMxlbgG.concise.ps2015-04-17 19:33 49MPrediction: coiled-coil, solvent, alignment
[ ]jp_kMxlbgG.fasta2015-04-17 19:16 782 Input query sequence in FASTA format
[ ]jp_kMxlbgG.full_MSA.fasta2015-04-17 19:31 15MFull MSA before JPred filters in FASTA
[TXT]jp_kMxlbgG.full_MSA.fasta.noGaps.html2015-04-17 19:34 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_kMxlbgG.full_MSA.fasta.withGaps.html2015-04-17 19:34 45MFull MSA before JPred filters in FASTA
[ ]jp_kMxlbgG.hmm2015-04-17 19:32 142KHHMer2 profile of the alignment
[TXT]jp_kMxlbgG.html2015-04-17 19:32 543KHTML prediction and alignment data
[ ]jp_kMxlbgG.input2015-04-17 17:49 766 Raw input data for analysis
[ ]jp_kMxlbgG.jalview2015-04-17 19:32 16KJalview annotation file for alignment
[ ]jp_kMxlbgG.jnet2015-04-17 19:32 28KJnet secondary structure output
[TXT]jp_kMxlbgG.profile2015-04-17 19:26 121KPSIBLAST profile from alignment
[ ]jp_kMxlbgG.pssm2015-04-17 19:32 163KPSIBLAST PSSM for Jnet
[TXT]jp_kMxlbgG.results.html2016-02-15 12:17 306KJPred results page
[TXT]jp_kMxlbgG.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_kMxlbgG.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_kMxlbgG.seq2015-04-17 17:49 782 Sequence data file
[TXT]jp_kMxlbgG.simple.html2015-04-17 19:32 3.4KBrief HTML: sequence and prediction only
[TXT]jp_kMxlbgG.svg.html2015-04-17 19:34 298KJalview SVG summary of results
[ ]jp_kMxlbgG.tar.gz2015-04-17 19:35 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.