A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:22 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1hbna1.name | 2015-04-17 18:24 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_dZYTM4z.align | 2015-04-17 20:22 | 68K | PSIBLAST alignment in FASTA format |
| jp_dZYTM4z.als | 2015-04-17 20:22 | 3.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_dZYTM4z.blast.gz | 2015-04-17 20:22 | 324K | Compressed PSIBLAST output file |
| jp_dZYTM4z.coils.csv | 2015-04-17 20:22 | 1.7K | COILS output in CSV format |
| jp_dZYTM4z.coilseq.lupas_14 | 2015-04-17 20:22 | 12K | COILS output, window length 14 |
| jp_dZYTM4z.coilseq.lupas_21 | 2015-04-17 20:22 | 12K | COILS output, window length 21 |
| jp_dZYTM4z.coilseq.lupas_28 | 2015-04-17 20:22 | 12K | COILS output, window length 28 |
| jp_dZYTM4z.concise | 2015-04-17 20:22 | 145K | Prediction: coiled-coil, solvent, alignment |
| jp_dZYTM4z.concise.blc | 2015-04-17 20:22 | 72K | BLC format prediction and alignment data |
| jp_dZYTM4z.concise.fasta | 2015-04-17 20:22 | 71K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_dZYTM4z.concise.pdf | 2015-04-17 20:22 | 364K | PDF prediction and alignment data |
| jp_dZYTM4z.concise.ps | 2015-04-17 20:22 | 8.1M | Prediction: coiled-coil, solvent, alignment |
| jp_dZYTM4z.fasta | 2015-04-17 20:16 | 295 | Input query sequence in FASTA format |
| jp_dZYTM4z.full_MSA.fasta | 2015-04-17 20:22 | 536K | Full MSA before JPred filters in FASTA |
| jp_dZYTM4z.full_MSA.fasta.noGaps.html | 2015-04-17 20:22 | 384K | Full MSA before JPred filters in FASTA |
| jp_dZYTM4z.full_MSA.fasta.withGaps.html | 2015-04-17 20:22 | 2.3M | Full MSA before JPred filters in FASTA |
| jp_dZYTM4z.hmm | 2015-04-17 20:22 | 52K | HHMer2 profile of the alignment |
| jp_dZYTM4z.html | 2015-04-17 20:22 | 133K | HTML prediction and alignment data |
| jp_dZYTM4z.input | 2015-04-17 18:24 | 286 | Raw input data for analysis |
| jp_dZYTM4z.jalview | 2015-04-17 20:22 | 6.2K | Jalview annotation file for alignment |
| jp_dZYTM4z.jnet | 2015-04-17 20:22 | 10K | Jnet secondary structure output |
| jp_dZYTM4z.profile | 2015-04-17 20:20 | 45K | PSIBLAST profile from alignment |
| jp_dZYTM4z.pssm | 2015-04-17 20:22 | 60K | PSIBLAST PSSM for Jnet |
| jp_dZYTM4z.results.html | 2016-02-15 12:17 | 121K | JPred results page |
| jp_dZYTM4z.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_dZYTM4z.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_dZYTM4z.seq | 2015-04-17 18:24 | 295 | Sequence data file |
| jp_dZYTM4z.simple.html | 2015-04-17 20:22 | 1.7K | Brief HTML: sequence and prediction only |
![[TXT]](jp_dZYTM4z.svg.html) | jp_dZYTM4z.svg.html | 2015-04-17 20:22 | 113K | Jalview SVG summary of results |
| jp_dZYTM4z.tar.gz | 2015-04-17 20:22 | 937K | Archive containing complete results |
