JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:18 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1hbna2.name2015-04-17 16:34 0 Job name flag file
[ ]jp_qZE9ouI.align2015-04-17 17:18 8.2KPSIBLAST alignment in FASTA format
[TXT]jp_qZE9ouI.als2015-04-17 17:18 4.3KAlscript command file for PS/PDF output
[ ]jp_qZE9ouI.blast.gz2015-04-17 17:18 42KCompressed PSIBLAST output file
[TXT]jp_qZE9ouI.coils.csv2015-04-17 17:18 1.6KCOILS output in CSV format
[ ]jp_qZE9ouI.coilseq.lupas_142015-04-17 17:18 11KCOILS output, window length 14
[ ]jp_qZE9ouI.coilseq.lupas_212015-04-17 17:18 11KCOILS output, window length 21
[ ]jp_qZE9ouI.coilseq.lupas_282015-04-17 17:18 11KCOILS output, window length 28
[ ]jp_qZE9ouI.concise2015-04-17 17:18 27KPrediction: coiled-coil, solvent, alignment
[ ]jp_qZE9ouI.concise.blc2015-04-17 17:18 12KBLC format prediction and alignment data
[ ]jp_qZE9ouI.concise.fasta2015-04-17 17:18 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_qZE9ouI.concise.pdf2015-04-17 17:18 76KPDF prediction and alignment data
[ ]jp_qZE9ouI.concise.ps2015-04-17 17:18 1.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_qZE9ouI.fasta2015-04-17 17:14 284 Input query sequence in FASTA format
[ ]jp_qZE9ouI.full_MSA.fasta2015-04-17 17:18 89KFull MSA before JPred filters in FASTA
[TXT]jp_qZE9ouI.full_MSA.fasta.noGaps.html2015-04-17 17:18 96KFull MSA before JPred filters in FASTA
[TXT]jp_qZE9ouI.full_MSA.fasta.withGaps.html2015-04-17 17:18 235KFull MSA before JPred filters in FASTA
[ ]jp_qZE9ouI.hmm2015-04-17 17:18 50KHHMer2 profile of the alignment
[TXT]jp_qZE9ouI.html2015-04-17 17:18 40KHTML prediction and alignment data
[ ]jp_qZE9ouI.input2015-04-17 16:34 275 Raw input data for analysis
[ ]jp_qZE9ouI.jalview2015-04-17 17:18 6.3KJalview annotation file for alignment
[ ]jp_qZE9ouI.jnet2015-04-17 17:18 9.8KJnet secondary structure output
[TXT]jp_qZE9ouI.profile2015-04-17 17:17 43KPSIBLAST profile from alignment
[ ]jp_qZE9ouI.pssm2015-04-17 17:18 58KPSIBLAST PSSM for Jnet
[TXT]jp_qZE9ouI.results.html2016-02-15 12:17 119KJPred results page
[TXT]jp_qZE9ouI.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_qZE9ouI.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_qZE9ouI.seq2015-04-17 16:34 284 Sequence data file
[TXT]jp_qZE9ouI.simple.html2015-04-17 17:18 1.9KBrief HTML: sequence and prediction only
[TXT]jp_qZE9ouI.svg.html2015-04-17 17:18 111KJalview SVG summary of results
[ ]jp_qZE9ouI.tar.gz2015-04-17 17:18 207KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.