JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:19 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1he1a_.name2015-04-17 17:13 0 Job name flag file
[ ]jp_C3Z3NvR.align2015-04-17 18:19 3.0KPSIBLAST alignment in FASTA format
[TXT]jp_C3Z3NvR.als2015-04-17 18:19 2.2KAlscript command file for PS/PDF output
[ ]jp_C3Z3NvR.blast.gz2015-04-17 18:19 6.4KCompressed PSIBLAST output file
[TXT]jp_C3Z3NvR.coils.csv2015-04-17 18:19 840 COILS output in CSV format
[ ]jp_C3Z3NvR.coilseq.lupas_142015-04-17 18:19 5.7KCOILS output, window length 14
[ ]jp_C3Z3NvR.coilseq.lupas_212015-04-17 18:19 5.7KCOILS output, window length 21
[ ]jp_C3Z3NvR.coilseq.lupas_282015-04-17 18:19 5.7KCOILS output, window length 28
[ ]jp_C3Z3NvR.concise2015-04-17 18:19 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_C3Z3NvR.concise.blc2015-04-17 18:19 5.0KBLC format prediction and alignment data
[ ]jp_C3Z3NvR.concise.fasta2015-04-17 18:19 4.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_C3Z3NvR.concise.pdf2015-04-17 18:19 35KPDF prediction and alignment data
[ ]jp_C3Z3NvR.concise.ps2015-04-17 18:19 611KPrediction: coiled-coil, solvent, alignment
[ ]jp_C3Z3NvR.fasta2015-04-17 18:17 149 Input query sequence in FASTA format
[ ]jp_C3Z3NvR.full_MSA.fasta2015-04-17 18:19 5.1KFull MSA before JPred filters in FASTA
[TXT]jp_C3Z3NvR.full_MSA.fasta.noGaps.html2015-04-17 18:19 8.2KFull MSA before JPred filters in FASTA
[TXT]jp_C3Z3NvR.full_MSA.fasta.withGaps.html2015-04-17 18:19 13KFull MSA before JPred filters in FASTA
[ ]jp_C3Z3NvR.hmm2015-04-17 18:19 25KHHMer2 profile of the alignment
[TXT]jp_C3Z3NvR.html2015-04-17 18:19 22KHTML prediction and alignment data
[ ]jp_C3Z3NvR.input2015-04-17 17:13 142 Raw input data for analysis
[ ]jp_C3Z3NvR.jalview2015-04-17 18:19 3.6KJalview annotation file for alignment
[ ]jp_C3Z3NvR.jnet2015-04-17 18:19 5.0KJnet secondary structure output
[TXT]jp_C3Z3NvR.profile2015-04-17 18:18 22KPSIBLAST profile from alignment
[ ]jp_C3Z3NvR.pssm2015-04-17 18:19 29KPSIBLAST PSSM for Jnet
[TXT]jp_C3Z3NvR.results.html2016-02-15 12:17 64KJPred results page
[TXT]jp_C3Z3NvR.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_C3Z3NvR.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_C3Z3NvR.seq2015-04-17 17:13 149 Sequence data file
[TXT]jp_C3Z3NvR.simple.html2015-04-17 18:19 1.3KBrief HTML: sequence and prediction only
[TXT]jp_C3Z3NvR.svg.html2015-04-17 18:19 56KJalview SVG summary of results
[ ]jp_C3Z3NvR.tar.gz2015-04-17 18:19 81KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.