JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_TLcZ38d.tar.gz2015-04-17 15:56 13MArchive containing complete results
[TXT]jp_TLcZ38d.svg.html2015-04-17 15:56 120KJalview SVG summary of results
[TXT]jp_TLcZ38d.simple.html2015-04-17 15:55 1.9KBrief HTML: sequence and prediction only
[ ]jp_TLcZ38d.seq2015-04-17 15:21 320 Sequence data file
[TXT]jp_TLcZ38d.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_TLcZ38d.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_TLcZ38d.results.html2016-02-15 12:17 128KJPred results page
[ ]jp_TLcZ38d.pssm2015-04-17 15:55 65KPSIBLAST PSSM for Jnet
[TXT]jp_TLcZ38d.profile2015-04-17 15:46 48KPSIBLAST profile from alignment
[ ]jp_TLcZ38d.jnet2015-04-17 15:55 11KJnet secondary structure output
[ ]jp_TLcZ38d.jalview2015-04-17 15:55 6.9KJalview annotation file for alignment
[ ]jp_TLcZ38d.input2015-04-17 15:21 310 Raw input data for analysis
[TXT]jp_TLcZ38d.html2015-04-17 15:55 412KHTML prediction and alignment data
[ ]jp_TLcZ38d.hmm2015-04-17 15:55 57KHHMer2 profile of the alignment
[TXT]jp_TLcZ38d.full_MSA.fasta.withGaps.html2015-04-17 15:56 36MFull MSA before JPred filters in FASTA
[TXT]jp_TLcZ38d.full_MSA.fasta.noGaps.html2015-04-17 15:56 1.3MFull MSA before JPred filters in FASTA
[ ]jp_TLcZ38d.full_MSA.fasta2015-04-17 15:54 14MFull MSA before JPred filters in FASTA
[ ]jp_TLcZ38d.fasta2015-04-17 15:21 320 Input query sequence in FASTA format
[ ]jp_TLcZ38d.concise.ps2015-04-17 15:55 30MPrediction: coiled-coil, solvent, alignment
[ ]jp_TLcZ38d.concise.pdf2015-04-17 15:55 1.6MPDF prediction and alignment data
[ ]jp_TLcZ38d.concise.fasta2015-04-17 15:55 243KPrediction: coiled-coil, solvent, alignment
[ ]jp_TLcZ38d.concise.blc2015-04-17 15:55 241KBLC format prediction and alignment data
[ ]jp_TLcZ38d.concise2015-04-17 15:55 479KPrediction: coiled-coil, solvent, alignment
[ ]jp_TLcZ38d.coilseq.lupas_282015-04-17 15:55 13KCOILS output, window length 28
[ ]jp_TLcZ38d.coilseq.lupas_212015-04-17 15:55 13KCOILS output, window length 21
[ ]jp_TLcZ38d.coilseq.lupas_142015-04-17 15:55 13KCOILS output, window length 14
[TXT]jp_TLcZ38d.coils.csv2015-04-17 15:55 1.8KCOILS output in CSV format
[ ]jp_TLcZ38d.blast.gz2015-04-17 15:53 7.6MCompressed PSIBLAST output file
[TXT]jp_TLcZ38d.als2015-04-17 15:55 3.9KAlscript command file for PS/PDF output
[ ]jp_TLcZ38d.align2015-04-17 15:55 240KPSIBLAST alignment in FASTA format
[TXT]d1i1wa_.name2015-04-17 15:21 0 Job name flag file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]LOG2015-04-17 15:56 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.