JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:18 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1i4ja_.name2015-04-17 16:34 0 Job name flag file
[ ]jp_gBdSqYN.align2015-04-17 17:17 84KPSIBLAST alignment in FASTA format
[TXT]jp_gBdSqYN.als2015-04-17 17:17 2.3KAlscript command file for PS/PDF output
[ ]jp_gBdSqYN.blast.gz2015-04-17 17:17 1.4MCompressed PSIBLAST output file
[TXT]jp_gBdSqYN.coils.csv2015-04-17 17:17 690 COILS output in CSV format
[ ]jp_gBdSqYN.coilseq.lupas_142015-04-17 17:17 4.6KCOILS output, window length 14
[ ]jp_gBdSqYN.coilseq.lupas_212015-04-17 17:17 4.6KCOILS output, window length 21
[ ]jp_gBdSqYN.coilseq.lupas_282015-04-17 17:17 4.6KCOILS output, window length 28
[ ]jp_gBdSqYN.concise2015-04-17 17:17 164KPrediction: coiled-coil, solvent, alignment
[ ]jp_gBdSqYN.concise.blc2015-04-17 17:17 84KBLC format prediction and alignment data
[ ]jp_gBdSqYN.concise.fasta2015-04-17 17:17 85KPrediction: coiled-coil, solvent, alignment
[ ]jp_gBdSqYN.concise.pdf2015-04-17 17:17 539KPDF prediction and alignment data
[ ]jp_gBdSqYN.concise.ps2015-04-17 17:17 9.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_gBdSqYN.fasta2015-04-17 17:14 124 Input query sequence in FASTA format
[ ]jp_gBdSqYN.full_MSA.fasta2015-04-17 17:17 3.1MFull MSA before JPred filters in FASTA
[TXT]jp_gBdSqYN.full_MSA.fasta.noGaps.html2015-04-17 17:17 799KFull MSA before JPred filters in FASTA
[TXT]jp_gBdSqYN.full_MSA.fasta.withGaps.html2015-04-17 17:17 9.5MFull MSA before JPred filters in FASTA
[ ]jp_gBdSqYN.hmm2015-04-17 17:17 21KHHMer2 profile of the alignment
[TXT]jp_gBdSqYN.html2015-04-17 17:17 223KHTML prediction and alignment data
[ ]jp_gBdSqYN.input2015-04-17 16:34 117 Raw input data for analysis
[ ]jp_gBdSqYN.jalview2015-04-17 17:17 3.0KJalview annotation file for alignment
[ ]jp_gBdSqYN.jnet2015-04-17 17:17 4.1KJnet secondary structure output
[TXT]jp_gBdSqYN.profile2015-04-17 17:16 18KPSIBLAST profile from alignment
[ ]jp_gBdSqYN.pssm2015-04-17 17:17 24KPSIBLAST PSSM for Jnet
[TXT]jp_gBdSqYN.results.html2016-02-15 12:17 54KJPred results page
[TXT]jp_gBdSqYN.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_gBdSqYN.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_gBdSqYN.seq2015-04-17 16:34 124 Sequence data file
[TXT]jp_gBdSqYN.simple.html2015-04-17 17:17 1.3KBrief HTML: sequence and prediction only
[TXT]jp_gBdSqYN.svg.html2015-04-17 17:17 46KJalview SVG summary of results
[ ]jp_gBdSqYN.tar.gz2015-04-17 17:18 2.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.