JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:23 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jb0a_.name2015-04-17 16:35 0 Job name flag file
[ ]jp_FqUVGut.align2015-04-17 17:23 75KPSIBLAST alignment in FASTA format
[TXT]jp_FqUVGut.als2015-04-17 17:23 7.4KAlscript command file for PS/PDF output
[ ]jp_FqUVGut.blast.gz2015-04-17 17:23 583KCompressed PSIBLAST output file
[TXT]jp_FqUVGut.coils.csv2015-04-17 17:23 4.4KCOILS output in CSV format
[ ]jp_FqUVGut.coilseq.lupas_142015-04-17 17:23 31KCOILS output, window length 14
[ ]jp_FqUVGut.coilseq.lupas_212015-04-17 17:23 31KCOILS output, window length 21
[ ]jp_FqUVGut.coilseq.lupas_282015-04-17 17:23 31KCOILS output, window length 28
[ ]jp_FqUVGut.concise2015-04-17 17:23 178KPrediction: coiled-coil, solvent, alignment
[ ]jp_FqUVGut.concise.blc2015-04-17 17:23 85KBLC format prediction and alignment data
[ ]jp_FqUVGut.concise.fasta2015-04-17 17:23 82KPrediction: coiled-coil, solvent, alignment
[ ]jp_FqUVGut.concise.pdf2015-04-17 17:23 561KPDF prediction and alignment data
[ ]jp_FqUVGut.concise.ps2015-04-17 17:23 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_FqUVGut.fasta2015-04-17 17:16 763 Input query sequence in FASTA format
[ ]jp_FqUVGut.full_MSA.fasta2015-04-17 17:23 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_FqUVGut.full_MSA.fasta.noGaps.html2015-04-17 17:23 520KFull MSA before JPred filters in FASTA
[TXT]jp_FqUVGut.full_MSA.fasta.withGaps.html2015-04-17 17:23 3.2MFull MSA before JPred filters in FASTA
[ ]jp_FqUVGut.hmm2015-04-17 17:23 139KHHMer2 profile of the alignment
[TXT]jp_FqUVGut.html2015-04-17 17:23 163KHTML prediction and alignment data
[ ]jp_FqUVGut.input2015-04-17 16:35 747 Raw input data for analysis
[ ]jp_FqUVGut.jalview2015-04-17 17:23 16KJalview annotation file for alignment
[ ]jp_FqUVGut.jnet2015-04-17 17:23 27KJnet secondary structure output
[TXT]jp_FqUVGut.profile2015-04-17 17:20 118KPSIBLAST profile from alignment
[ ]jp_FqUVGut.pssm2015-04-17 17:23 159KPSIBLAST PSSM for Jnet
[TXT]jp_FqUVGut.results.html2016-02-15 12:17 302KJPred results page
[TXT]jp_FqUVGut.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_FqUVGut.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_FqUVGut.seq2015-04-17 16:35 763 Sequence data file
[TXT]jp_FqUVGut.simple.html2015-04-17 17:23 3.3KBrief HTML: sequence and prediction only
[TXT]jp_FqUVGut.svg.html2015-04-17 17:23 294KJalview SVG summary of results
[ ]jp_FqUVGut.tar.gz2015-04-17 17:23 1.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.