JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:51 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jb0d_.name2015-04-17 15:22 0 Job name flag file
[ ]jp_pQqz8eT.align2015-04-17 15:51 7.7KPSIBLAST alignment in FASTA format
[TXT]jp_pQqz8eT.als2015-04-17 15:51 2.6KAlscript command file for PS/PDF output
[ ]jp_pQqz8eT.blast.gz2015-04-17 15:51 36KCompressed PSIBLAST output file
[TXT]jp_pQqz8eT.coils.csv2015-04-17 15:51 858 COILS output in CSV format
[ ]jp_pQqz8eT.coilseq.lupas_142015-04-17 15:51 5.8KCOILS output, window length 14
[ ]jp_pQqz8eT.coilseq.lupas_212015-04-17 15:51 5.8KCOILS output, window length 21
[ ]jp_pQqz8eT.coilseq.lupas_282015-04-17 15:51 5.8KCOILS output, window length 28
[ ]jp_pQqz8eT.concise2015-04-17 15:51 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_pQqz8eT.concise.blc2015-04-17 15:51 9.7KBLC format prediction and alignment data
[ ]jp_pQqz8eT.concise.fasta2015-04-17 15:51 9.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_pQqz8eT.concise.pdf2015-04-17 15:51 59KPDF prediction and alignment data
[ ]jp_pQqz8eT.concise.ps2015-04-17 15:51 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_pQqz8eT.fasta2015-04-17 15:22 152 Input query sequence in FASTA format
[ ]jp_pQqz8eT.full_MSA.fasta2015-04-17 15:51 37KFull MSA before JPred filters in FASTA
[TXT]jp_pQqz8eT.full_MSA.fasta.noGaps.html2015-04-17 15:51 45KFull MSA before JPred filters in FASTA
[TXT]jp_pQqz8eT.full_MSA.fasta.withGaps.html2015-04-17 15:51 113KFull MSA before JPred filters in FASTA
[ ]jp_pQqz8eT.hmm2015-04-17 15:51 26KHHMer2 profile of the alignment
[TXT]jp_pQqz8eT.html2015-04-17 15:51 29KHTML prediction and alignment data
[ ]jp_pQqz8eT.input2015-04-17 15:22 145 Raw input data for analysis
[ ]jp_pQqz8eT.jalview2015-04-17 15:51 3.5KJalview annotation file for alignment
[ ]jp_pQqz8eT.jnet2015-04-17 15:51 5.1KJnet secondary structure output
[TXT]jp_pQqz8eT.profile2015-04-17 15:48 22KPSIBLAST profile from alignment
[ ]jp_pQqz8eT.pssm2015-04-17 15:51 30KPSIBLAST PSSM for Jnet
[TXT]jp_pQqz8eT.results.html2016-02-15 12:17 65KJPred results page
[TXT]jp_pQqz8eT.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_pQqz8eT.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_pQqz8eT.seq2015-04-17 15:22 152 Sequence data file
[TXT]jp_pQqz8eT.simple.html2015-04-17 15:51 1.4KBrief HTML: sequence and prediction only
[TXT]jp_pQqz8eT.svg.html2015-04-17 15:51 57KJalview SVG summary of results
[ ]jp_pQqz8eT.tar.gz2015-04-17 15:51 156KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.