JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:20 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jb3a_.name2015-04-17 16:35 0 Job name flag file
[ ]jp_uddkoox.align2015-04-17 17:20 5.2KPSIBLAST alignment in FASTA format
[TXT]jp_uddkoox.als2015-04-17 17:20 2.5KAlscript command file for PS/PDF output
[ ]jp_uddkoox.blast.gz2015-04-17 17:20 28KCompressed PSIBLAST output file
[TXT]jp_uddkoox.coils.csv2015-04-17 17:20 792 COILS output in CSV format
[ ]jp_uddkoox.coilseq.lupas_142015-04-17 17:20 5.3KCOILS output, window length 14
[ ]jp_uddkoox.coilseq.lupas_212015-04-17 17:20 5.3KCOILS output, window length 21
[ ]jp_uddkoox.coilseq.lupas_282015-04-17 17:20 5.3KCOILS output, window length 28
[ ]jp_uddkoox.concise2015-04-17 17:20 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_uddkoox.concise.blc2015-04-17 17:20 7.1KBLC format prediction and alignment data
[ ]jp_uddkoox.concise.fasta2015-04-17 17:20 6.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_uddkoox.concise.pdf2015-04-17 17:20 82KPDF prediction and alignment data
[ ]jp_uddkoox.concise.ps2015-04-17 17:20 1.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_uddkoox.fasta2015-04-17 17:17 141 Input query sequence in FASTA format
[ ]jp_uddkoox.full_MSA.fasta2015-04-17 17:20 37KFull MSA before JPred filters in FASTA
[TXT]jp_uddkoox.full_MSA.fasta.noGaps.html2015-04-17 17:20 34KFull MSA before JPred filters in FASTA
[TXT]jp_uddkoox.full_MSA.fasta.withGaps.html2015-04-17 17:20 141KFull MSA before JPred filters in FASTA
[ ]jp_uddkoox.hmm2015-04-17 17:20 24KHHMer2 profile of the alignment
[TXT]jp_uddkoox.html2015-04-17 17:20 24KHTML prediction and alignment data
[ ]jp_uddkoox.input2015-04-17 16:35 134 Raw input data for analysis
[ ]jp_uddkoox.jalview2015-04-17 17:20 3.3KJalview annotation file for alignment
[ ]jp_uddkoox.jnet2015-04-17 17:20 4.7KJnet secondary structure output
[TXT]jp_uddkoox.profile2015-04-17 17:19 21KPSIBLAST profile from alignment
[ ]jp_uddkoox.pssm2015-04-17 17:20 27KPSIBLAST PSSM for Jnet
[TXT]jp_uddkoox.results.html2016-02-15 12:17 60KJPred results page
[TXT]jp_uddkoox.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_uddkoox.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_uddkoox.seq2015-04-17 16:35 141 Sequence data file
[TXT]jp_uddkoox.simple.html2015-04-17 17:20 1.3KBrief HTML: sequence and prediction only
[TXT]jp_uddkoox.svg.html2015-04-17 17:20 52KJalview SVG summary of results
[ ]jp_uddkoox.tar.gz2015-04-17 17:20 157KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.