JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:03 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jfba_.name2015-04-17 17:14 0 Job name flag file
[ ]jp_Jlosg1v.align2015-04-17 19:01 380KPSIBLAST alignment in FASTA format
[TXT]jp_Jlosg1v.als2015-04-17 19:01 4.7KAlscript command file for PS/PDF output
[ ]jp_Jlosg1v.blast.gz2015-04-17 18:56 34MCompressed PSIBLAST output file
[TXT]jp_Jlosg1v.coils.csv2015-04-17 19:01 2.4KCOILS output in CSV format
[ ]jp_Jlosg1v.coilseq.lupas_142015-04-17 19:01 17KCOILS output, window length 14
[ ]jp_Jlosg1v.coilseq.lupas_212015-04-17 19:01 17KCOILS output, window length 21
[ ]jp_Jlosg1v.coilseq.lupas_282015-04-17 19:01 17KCOILS output, window length 28
[ ]jp_Jlosg1v.concise2015-04-17 19:01 757KPrediction: coiled-coil, solvent, alignment
[ ]jp_Jlosg1v.concise.blc2015-04-17 19:01 381KBLC format prediction and alignment data
[ ]jp_Jlosg1v.concise.fasta2015-04-17 19:01 384KPrediction: coiled-coil, solvent, alignment
[ ]jp_Jlosg1v.concise.pdf2015-04-17 19:02 2.9MPDF prediction and alignment data
[ ]jp_Jlosg1v.concise.ps2015-04-17 19:01 49MPrediction: coiled-coil, solvent, alignment
[ ]jp_Jlosg1v.fasta2015-04-17 18:19 417 Input query sequence in FASTA format
[ ]jp_Jlosg1v.full_MSA.fasta2015-04-17 18:59 64MFull MSA before JPred filters in FASTA
[TXT]jp_Jlosg1v.full_MSA.fasta.noGaps.html2015-04-17 19:03 5.1MFull MSA before JPred filters in FASTA
[TXT]jp_Jlosg1v.full_MSA.fasta.withGaps.html2015-04-17 19:03 156MFull MSA before JPred filters in FASTA
[ ]jp_Jlosg1v.hmm2015-04-17 19:01 75KHHMer2 profile of the alignment
[TXT]jp_Jlosg1v.html2015-04-17 19:01 588KHTML prediction and alignment data
[ ]jp_Jlosg1v.input2015-04-17 17:14 406 Raw input data for analysis
[ ]jp_Jlosg1v.jalview2015-04-17 19:01 8.8KJalview annotation file for alignment
[ ]jp_Jlosg1v.jnet2015-04-17 19:01 15KJnet secondary structure output
[TXT]jp_Jlosg1v.profile2015-04-17 18:53 64KPSIBLAST profile from alignment
[ ]jp_Jlosg1v.pssm2015-04-17 19:01 86KPSIBLAST PSSM for Jnet
[TXT]jp_Jlosg1v.results.html2016-02-15 12:17 167KJPred results page
[TXT]jp_Jlosg1v.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Jlosg1v.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Jlosg1v.seq2015-04-17 17:14 417 Sequence data file
[TXT]jp_Jlosg1v.simple.html2015-04-17 19:01 2.2KBrief HTML: sequence and prediction only
[TXT]jp_Jlosg1v.svg.html2015-04-17 19:03 159KJalview SVG summary of results
[ ]jp_Jlosg1v.tar.gz2015-04-17 19:04 55MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.