A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 18:07 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1jhga_.name | 2015-04-17 16:36 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_n4wvjMr.align | 2015-04-17 18:07 | 64K | PSIBLAST alignment in FASTA format |
| jp_n4wvjMr.als | 2015-04-17 18:07 | 2.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_n4wvjMr.blast.gz | 2015-04-17 18:06 | 103K | Compressed PSIBLAST output file |
| jp_n4wvjMr.coils.csv | 2015-04-17 18:07 | 642 | COILS output in CSV format |
| jp_n4wvjMr.coilseq.lupas_14 | 2015-04-17 18:07 | 4.3K | COILS output, window length 14 |
| jp_n4wvjMr.coilseq.lupas_21 | 2015-04-17 18:07 | 4.3K | COILS output, window length 21 |
| jp_n4wvjMr.coilseq.lupas_28 | 2015-04-17 18:07 | 4.3K | COILS output, window length 28 |
| jp_n4wvjMr.concise | 2015-04-17 18:07 | 125K | Prediction: coiled-coil, solvent, alignment |
| jp_n4wvjMr.concise.blc | 2015-04-17 18:07 | 65K | BLC format prediction and alignment data |
| jp_n4wvjMr.concise.fasta | 2015-04-17 18:07 | 65K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_n4wvjMr.concise.pdf | 2015-04-17 18:07 | 380K | PDF prediction and alignment data |
| jp_n4wvjMr.concise.ps | 2015-04-17 18:07 | 7.2M | Prediction: coiled-coil, solvent, alignment |
| jp_n4wvjMr.fasta | 2015-04-17 17:17 | 116 | Input query sequence in FASTA format |
| jp_n4wvjMr.full_MSA.fasta | 2015-04-17 18:06 | 180K | Full MSA before JPred filters in FASTA |
| jp_n4wvjMr.full_MSA.fasta.noGaps.html | 2015-04-17 18:07 | 216K | Full MSA before JPred filters in FASTA |
| jp_n4wvjMr.full_MSA.fasta.withGaps.html | 2015-04-17 18:07 | 941K | Full MSA before JPred filters in FASTA |
| jp_n4wvjMr.hmm | 2015-04-17 18:07 | 19K | HHMer2 profile of the alignment |
| jp_n4wvjMr.html | 2015-04-17 18:07 | 179K | HTML prediction and alignment data |
| jp_n4wvjMr.input | 2015-04-17 16:36 | 109 | Raw input data for analysis |
| jp_n4wvjMr.jalview | 2015-04-17 18:07 | 2.9K | Jalview annotation file for alignment |
| jp_n4wvjMr.jnet | 2015-04-17 18:07 | 3.8K | Jnet secondary structure output |
| jp_n4wvjMr.profile | 2015-04-17 17:53 | 17K | PSIBLAST profile from alignment |
| jp_n4wvjMr.pssm | 2015-04-17 18:07 | 22K | PSIBLAST PSSM for Jnet |
| jp_n4wvjMr.results.html | 2016-02-15 12:17 | 52K | JPred results page |
| jp_n4wvjMr.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_n4wvjMr.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_n4wvjMr.seq | 2015-04-17 16:36 | 116 | Sequence data file |
| jp_n4wvjMr.simple.html | 2015-04-17 18:07 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_n4wvjMr.svg.html) | jp_n4wvjMr.svg.html | 2015-04-17 18:07 | 44K | Jalview SVG summary of results |
| jp_n4wvjMr.tar.gz | 2015-04-17 18:07 | 686K | Archive containing complete results |
