A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 21:20 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1ji7a_.name | 2015-04-17 19:02 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_YLAt4jc.align | 2015-04-17 21:20 | 30K | PSIBLAST alignment in FASTA format |
| jp_YLAt4jc.als | 2015-04-17 21:20 | 1.9K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_YLAt4jc.blast.gz | 2015-04-17 21:20 | 174K | Compressed PSIBLAST output file |
| jp_YLAt4jc.coils.csv | 2015-04-17 21:20 | 492 | COILS output in CSV format |
| jp_YLAt4jc.coilseq.lupas_14 | 2015-04-17 21:20 | 3.2K | COILS output, window length 14 |
| jp_YLAt4jc.coilseq.lupas_21 | 2015-04-17 21:20 | 3.2K | COILS output, window length 21 |
| jp_YLAt4jc.coilseq.lupas_28 | 2015-04-17 21:20 | 3.2K | COILS output, window length 28 |
| jp_YLAt4jc.concise | 2015-04-17 21:20 | 59K | Prediction: coiled-coil, solvent, alignment |
| jp_YLAt4jc.concise.blc | 2015-04-17 21:20 | 31K | BLC format prediction and alignment data |
| jp_YLAt4jc.concise.fasta | 2015-04-17 21:20 | 31K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_YLAt4jc.concise.pdf | 2015-04-17 21:20 | 191K | PDF prediction and alignment data |
| jp_YLAt4jc.concise.ps | 2015-04-17 21:20 | 3.3M | Prediction: coiled-coil, solvent, alignment |
| jp_YLAt4jc.fasta | 2015-04-17 21:16 | 91 | Input query sequence in FASTA format |
| jp_YLAt4jc.full_MSA.fasta | 2015-04-17 21:20 | 215K | Full MSA before JPred filters in FASTA |
| jp_YLAt4jc.full_MSA.fasta.noGaps.html | 2015-04-17 21:20 | 208K | Full MSA before JPred filters in FASTA |
| jp_YLAt4jc.full_MSA.fasta.withGaps.html | 2015-04-17 21:20 | 1.2M | Full MSA before JPred filters in FASTA |
| jp_YLAt4jc.hmm | 2015-04-17 21:20 | 14K | HHMer2 profile of the alignment |
| jp_YLAt4jc.html | 2015-04-17 21:20 | 99K | HTML prediction and alignment data |
| jp_YLAt4jc.input | 2015-04-17 19:02 | 84 | Raw input data for analysis |
| jp_YLAt4jc.jalview | 2015-04-17 21:20 | 2.4K | Jalview annotation file for alignment |
| jp_YLAt4jc.jnet | 2015-04-17 21:20 | 2.9K | Jnet secondary structure output |
| jp_YLAt4jc.profile | 2015-04-17 21:19 | 13K | PSIBLAST profile from alignment |
| jp_YLAt4jc.pssm | 2015-04-17 21:20 | 17K | PSIBLAST PSSM for Jnet |
| jp_YLAt4jc.results.html | 2016-02-15 12:17 | 42K | JPred results page |
| jp_YLAt4jc.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_YLAt4jc.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_YLAt4jc.seq | 2015-04-17 19:02 | 91 | Sequence data file |
| jp_YLAt4jc.simple.html | 2015-04-17 21:20 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_YLAt4jc.svg.html) | jp_YLAt4jc.svg.html | 2015-04-17 21:20 | 34K | Jalview SVG summary of results |
| jp_YLAt4jc.tar.gz | 2015-04-17 21:20 | 547K | Archive containing complete results |
