JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_wME0I5I.als2015-04-17 20:21 2.2KAlscript command file for PS/PDF output
[ ]jp_wME0I5I.tar.gz2015-04-17 20:21 1.5MArchive containing complete results
[ ]jp_wME0I5I.concise.blc2015-04-17 20:21 76KBLC format prediction and alignment data
[TXT]jp_wME0I5I.simple.html2015-04-17 20:21 1.2KBrief HTML: sequence and prediction only
[TXT]jp_wME0I5I.coils.csv2015-04-17 20:21 612 COILS output in CSV format
[ ]jp_wME0I5I.coilseq.lupas_142015-04-17 20:21 4.1KCOILS output, window length 14
[ ]jp_wME0I5I.coilseq.lupas_212015-04-17 20:21 4.1KCOILS output, window length 21
[ ]jp_wME0I5I.coilseq.lupas_282015-04-17 20:21 4.1KCOILS output, window length 28
[ ]jp_wME0I5I.blast.gz2015-04-17 20:20 519KCompressed PSIBLAST output file
[ ]jp_wME0I5I.full_MSA.fasta2015-04-17 20:20 888KFull MSA before JPred filters in FASTA
[TXT]jp_wME0I5I.full_MSA.fasta.noGaps.html2015-04-17 20:21 531KFull MSA before JPred filters in FASTA
[TXT]jp_wME0I5I.full_MSA.fasta.withGaps.html2015-04-17 20:21 4.5MFull MSA before JPred filters in FASTA
[ ]jp_wME0I5I.hmm2015-04-17 20:21 18KHHMer2 profile of the alignment
[TXT]jp_wME0I5I.html2015-04-17 20:21 214KHTML prediction and alignment data
[TXT]jp_wME0I5I.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_wME0I5I.fasta2015-04-17 20:18 111 Input query sequence in FASTA format
[TXT]jp_wME0I5I.results.html2016-02-15 12:17 49KJPred results page
[TXT]LOG2015-04-17 20:21 4.7KJPred server log file
[TXT]jp_wME0I5I.svg.html2015-04-17 20:21 41KJalview SVG summary of results
[ ]jp_wME0I5I.jalview2015-04-17 20:21 2.8KJalview annotation file for alignment
[TXT]jp_wME0I5I.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_wME0I5I.jnet2015-04-17 20:21 3.6KJnet secondary structure output
[TXT]d1jo0a_.name2015-04-17 18:25 0 Job name flag file
[ ]jp_wME0I5I.concise.pdf2015-04-17 20:21 490KPDF prediction and alignment data
[ ]jp_wME0I5I.pssm2015-04-17 20:21 21KPSIBLAST PSSM for Jnet
[ ]jp_wME0I5I.align2015-04-17 20:21 76KPSIBLAST alignment in FASTA format
[TXT]jp_wME0I5I.profile2015-04-17 20:20 16KPSIBLAST profile from alignment
[ ]jp_wME0I5I.concise2015-04-17 20:21 147KPrediction: coiled-coil, solvent, alignment
[ ]jp_wME0I5I.concise.fasta2015-04-17 20:21 77KPrediction: coiled-coil, solvent, alignment
[ ]jp_wME0I5I.concise.ps2015-04-17 20:21 8.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_wME0I5I.input2015-04-17 18:25 104 Raw input data for analysis
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[ ]jp_wME0I5I.seq2015-04-17 18:25 111 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.