JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:29 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1jx4a1.name2015-04-17 19:03 0 Job name flag file
[ ]jp_965URV0.align2015-04-17 21:28 127KPSIBLAST alignment in FASTA format
[TXT]jp_965URV0.als2015-04-17 21:28 2.1KAlscript command file for PS/PDF output
[ ]jp_965URV0.blast.gz2015-04-17 21:26 772KCompressed PSIBLAST output file
[TXT]jp_965URV0.coils.csv2015-04-17 21:28 636 COILS output in CSV format
[ ]jp_965URV0.coilseq.lupas_142015-04-17 21:28 4.2KCOILS output, window length 14
[ ]jp_965URV0.coilseq.lupas_212015-04-17 21:28 4.2KCOILS output, window length 21
[ ]jp_965URV0.coilseq.lupas_282015-04-17 21:28 4.2KCOILS output, window length 28
[ ]jp_965URV0.concise2015-04-17 21:28 243KPrediction: coiled-coil, solvent, alignment
[ ]jp_965URV0.concise.blc2015-04-17 21:28 126KBLC format prediction and alignment data
[ ]jp_965URV0.concise.fasta2015-04-17 21:28 128KPrediction: coiled-coil, solvent, alignment
[ ]jp_965URV0.concise.pdf2015-04-17 21:29 859KPDF prediction and alignment data
[ ]jp_965URV0.concise.ps2015-04-17 21:28 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_965URV0.fasta2015-04-17 21:18 115 Input query sequence in FASTA format
[ ]jp_965URV0.full_MSA.fasta2015-04-17 21:27 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_965URV0.full_MSA.fasta.noGaps.html2015-04-17 21:29 891KFull MSA before JPred filters in FASTA
[TXT]jp_965URV0.full_MSA.fasta.withGaps.html2015-04-17 21:29 12MFull MSA before JPred filters in FASTA
[ ]jp_965URV0.hmm2015-04-17 21:28 19KHHMer2 profile of the alignment
[TXT]jp_965URV0.html2015-04-17 21:28 342KHTML prediction and alignment data
[ ]jp_965URV0.input2015-04-17 19:03 108 Raw input data for analysis
[ ]jp_965URV0.jalview2015-04-17 21:28 2.9KJalview annotation file for alignment
[ ]jp_965URV0.jnet2015-04-17 21:28 3.8KJnet secondary structure output
[TXT]jp_965URV0.profile2015-04-17 21:23 16KPSIBLAST profile from alignment
[ ]jp_965URV0.pssm2015-04-17 21:28 22KPSIBLAST PSSM for Jnet
[TXT]jp_965URV0.results.html2016-02-15 12:17 50KJPred results page
[TXT]jp_965URV0.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_965URV0.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_965URV0.seq2015-04-17 19:03 115 Sequence data file
[TXT]jp_965URV0.simple.html2015-04-17 21:28 1.2KBrief HTML: sequence and prediction only
[TXT]jp_965URV0.svg.html2015-04-17 21:29 42KJalview SVG summary of results
[ ]jp_965URV0.tar.gz2015-04-17 21:29 3.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.