A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 15:24 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1k1fa_.name | 2015-04-17 15:22 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_k_Vhyet.align | 2015-04-17 15:24 | 1.2K | PSIBLAST alignment in FASTA format |
| jp_k_Vhyet.als | 2015-04-17 15:24 | 1.6K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_k_Vhyet.blast.gz | 2015-04-17 15:24 | 6.0K | Compressed PSIBLAST output file |
| jp_k_Vhyet.coils.csv | 2015-04-17 15:24 | 432 | COILS output in CSV format |
| jp_k_Vhyet.coilseq.lupas_14 | 2015-04-17 15:24 | 2.8K | COILS output, window length 14 |
| jp_k_Vhyet.coilseq.lupas_21 | 2015-04-17 15:24 | 2.8K | COILS output, window length 21 |
| jp_k_Vhyet.coilseq.lupas_28 | 2015-04-17 15:24 | 2.8K | COILS output, window length 28 |
| jp_k_Vhyet.concise | 2015-04-17 15:24 | 5.1K | Prediction: coiled-coil, solvent, alignment |
| jp_k_Vhyet.concise.blc | 2015-04-17 15:24 | 2.2K | BLC format prediction and alignment data |
| jp_k_Vhyet.concise.fasta | 2015-04-17 15:24 | 1.9K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_k_Vhyet.concise.pdf | 2015-04-17 15:24 | 15K | PDF prediction and alignment data |
| jp_k_Vhyet.concise.ps | 2015-04-17 15:24 | 247K | Prediction: coiled-coil, solvent, alignment |
| jp_k_Vhyet.fasta | 2015-04-17 15:22 | 80 | Input query sequence in FASTA format |
| jp_k_Vhyet.full_MSA.fasta | 2015-04-17 15:24 | 6.7K | Full MSA before JPred filters in FASTA |
| jp_k_Vhyet.full_MSA.fasta.noGaps.html | 2015-04-17 15:24 | 16K | Full MSA before JPred filters in FASTA |
| jp_k_Vhyet.full_MSA.fasta.withGaps.html | 2015-04-17 15:24 | 18K | Full MSA before JPred filters in FASTA |
| jp_k_Vhyet.hmm | 2015-04-17 15:24 | 13K | HHMer2 profile of the alignment |
| jp_k_Vhyet.html | 2015-04-17 15:24 | 15K | HTML prediction and alignment data |
| jp_k_Vhyet.input | 2015-04-17 15:22 | 74 | Raw input data for analysis |
| jp_k_Vhyet.jalview | 2015-04-17 15:24 | 2.2K | Jalview annotation file for alignment |
| jp_k_Vhyet.jnet | 2015-04-17 15:24 | 2.5K | Jnet secondary structure output |
| jp_k_Vhyet.profile | 2015-04-17 15:24 | 11K | PSIBLAST profile from alignment |
| jp_k_Vhyet.pssm | 2015-04-17 15:24 | 14K | PSIBLAST PSSM for Jnet |
| jp_k_Vhyet.results.html | 2016-02-15 12:17 | 36K | JPred results page |
| jp_k_Vhyet.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_k_Vhyet.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_k_Vhyet.seq | 2015-04-17 15:22 | 80 | Sequence data file |
| jp_k_Vhyet.simple.html | 2015-04-17 15:24 | 1.0K | Brief HTML: sequence and prediction only |
![[TXT]](jp_k_Vhyet.svg.html) | jp_k_Vhyet.svg.html | 2015-04-17 15:24 | 28K | Jalview SVG summary of results |
| jp_k_Vhyet.tar.gz | 2015-04-17 15:24 | 44K | Archive containing complete results |
