JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_7oHsP9C.input2015-04-17 15:59 367 Raw input data for analysis
[ ]jp_7oHsP9C.seq2015-04-17 15:59 378 Sequence data file
[TXT]d1k32a3.name2015-04-17 15:59 0 Job name flag file
[ ]jp_7oHsP9C.fasta2015-04-17 16:17 378 Input query sequence in FASTA format
[TXT]jp_7oHsP9C.profile2015-04-17 16:31 57KPSIBLAST profile from alignment
[ ]jp_7oHsP9C.blast.gz2015-04-17 16:37 113MCompressed PSIBLAST output file
[ ]jp_7oHsP9C.full_MSA.fasta2015-04-17 16:59 570MFull MSA before JPred filters in FASTA
[ ]jp_7oHsP9C.align2015-04-17 17:11 286KPSIBLAST alignment in FASTA format
[ ]jp_7oHsP9C.pssm2015-04-17 17:11 77KPSIBLAST PSSM for Jnet
[ ]jp_7oHsP9C.hmm2015-04-17 17:11 68KHHMer2 profile of the alignment
[ ]jp_7oHsP9C.jnet2015-04-17 17:11 13KJnet secondary structure output
[ ]jp_7oHsP9C.coilseq.lupas_212015-04-17 17:11 15KCOILS output, window length 21
[ ]jp_7oHsP9C.coilseq.lupas_142015-04-17 17:11 15KCOILS output, window length 14
[ ]jp_7oHsP9C.coilseq.lupas_282015-04-17 17:11 15KCOILS output, window length 28
[TXT]jp_7oHsP9C.coils.csv2015-04-17 17:11 2.1KCOILS output in CSV format
[ ]jp_7oHsP9C.concise2015-04-17 17:11 573KPrediction: coiled-coil, solvent, alignment
[TXT]jp_7oHsP9C.html2015-04-17 17:11 461KHTML prediction and alignment data
[TXT]jp_7oHsP9C.simple.html2015-04-17 17:11 2.5KBrief HTML: sequence and prediction only
[ ]jp_7oHsP9C.jalview2015-04-17 17:11 8.0KJalview annotation file for alignment
[ ]jp_7oHsP9C.concise.fasta2015-04-17 17:11 291KPrediction: coiled-coil, solvent, alignment
[ ]jp_7oHsP9C.concise.blc2015-04-17 17:11 288KBLC format prediction and alignment data
[TXT]jp_7oHsP9C.als2015-04-17 17:11 6.3KAlscript command file for PS/PDF output
[ ]jp_7oHsP9C.concise.ps2015-04-17 17:11 35MPrediction: coiled-coil, solvent, alignment
[ ]jp_7oHsP9C.concise.pdf2015-04-17 17:11 1.9MPDF prediction and alignment data
[TXT]jp_7oHsP9C.full_MSA.fasta.withGaps.html2015-04-17 17:25 958MFull MSA before JPred filters in FASTA
[TXT]jp_7oHsP9C.full_MSA.fasta.noGaps.html2015-04-17 17:25 22MFull MSA before JPred filters in FASTA
[TXT]jp_7oHsP9C.svg.html2015-04-17 17:25 144KJalview SVG summary of results
[TXT]LOG2015-04-17 17:25 4.7KJPred server log file
[ ]jp_7oHsP9C.tar.gz2015-04-17 17:26 183MArchive containing complete results
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]jp_7oHsP9C.results.html2016-02-15 12:17 152KJPred results page
[TXT]jp_7oHsP9C.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_7oHsP9C.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.