A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 16:03 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1k5na2.name | 2015-04-17 15:23 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_RHSBUiC.align | 2015-04-17 16:03 | 96K | PSIBLAST alignment in FASTA format |
| jp_RHSBUiC.als | 2015-04-17 16:03 | 3.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_RHSBUiC.blast.gz | 2015-04-17 16:02 | 2.9M | Compressed PSIBLAST output file |
| jp_RHSBUiC.coils.csv | 2015-04-17 16:03 | 1.1K | COILS output in CSV format |
| jp_RHSBUiC.coilseq.lupas_14 | 2015-04-17 16:03 | 7.6K | COILS output, window length 14 |
| jp_RHSBUiC.coilseq.lupas_21 | 2015-04-17 16:03 | 7.6K | COILS output, window length 21 |
| jp_RHSBUiC.coilseq.lupas_28 | 2015-04-17 16:03 | 7.6K | COILS output, window length 28 |
| jp_RHSBUiC.concise | 2015-04-17 16:03 | 192K | Prediction: coiled-coil, solvent, alignment |
| jp_RHSBUiC.concise.blc | 2015-04-17 16:03 | 97K | BLC format prediction and alignment data |
| jp_RHSBUiC.concise.fasta | 2015-04-17 16:03 | 98K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_RHSBUiC.concise.pdf | 2015-04-17 16:03 | 629K | PDF prediction and alignment data |
| jp_RHSBUiC.concise.ps | 2015-04-17 16:03 | 12M | Prediction: coiled-coil, solvent, alignment |
| jp_RHSBUiC.fasta | 2015-04-17 15:23 | 196 | Input query sequence in FASTA format |
| jp_RHSBUiC.full_MSA.fasta | 2015-04-17 16:02 | 5.1M | Full MSA before JPred filters in FASTA |
| jp_RHSBUiC.full_MSA.fasta.noGaps.html | 2015-04-17 16:03 | 1.6M | Full MSA before JPred filters in FASTA |
| jp_RHSBUiC.full_MSA.fasta.withGaps.html | 2015-04-17 16:03 | 22M | Full MSA before JPred filters in FASTA |
| jp_RHSBUiC.hmm | 2015-04-17 16:03 | 34K | HHMer2 profile of the alignment |
| jp_RHSBUiC.html | 2015-04-17 16:03 | 206K | HTML prediction and alignment data |
| jp_RHSBUiC.input | 2015-04-17 15:23 | 188 | Raw input data for analysis |
| jp_RHSBUiC.jalview | 2015-04-17 16:03 | 4.5K | Jalview annotation file for alignment |
| jp_RHSBUiC.jnet | 2015-04-17 16:03 | 6.7K | Jnet secondary structure output |
| jp_RHSBUiC.profile | 2015-04-17 15:43 | 29K | PSIBLAST profile from alignment |
| jp_RHSBUiC.pssm | 2015-04-17 16:03 | 39K | PSIBLAST PSSM for Jnet |
| jp_RHSBUiC.results.html | 2016-02-15 12:17 | 82K | JPred results page |
| jp_RHSBUiC.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_RHSBUiC.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_RHSBUiC.seq | 2015-04-17 15:23 | 196 | Sequence data file |
| jp_RHSBUiC.simple.html | 2015-04-17 16:03 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_RHSBUiC.svg.html) | jp_RHSBUiC.svg.html | 2015-04-17 16:03 | 74K | Jalview SVG summary of results |
| jp_RHSBUiC.tar.gz | 2015-04-17 16:03 | 5.7M | Archive containing complete results |
