JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:27 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1kafa_.name2015-04-17 17:50 0 Job name flag file
[ ]jp_E4Ix3aB.align2015-04-17 19:27 1.7KPSIBLAST alignment in FASTA format
[TXT]jp_E4Ix3aB.als2015-04-17 19:27 2.5KAlscript command file for PS/PDF output
[ ]jp_E4Ix3aB.blast.gz2015-04-17 19:27 3.9KCompressed PSIBLAST output file
[TXT]jp_E4Ix3aB.coils.csv2015-04-17 19:27 678 COILS output in CSV format
[ ]jp_E4Ix3aB.coilseq.lupas_142015-04-17 19:27 4.5KCOILS output, window length 14
[ ]jp_E4Ix3aB.coilseq.lupas_212015-04-17 19:27 4.5KCOILS output, window length 21
[ ]jp_E4Ix3aB.coilseq.lupas_282015-04-17 19:27 4.5KCOILS output, window length 28
[ ]jp_E4Ix3aB.concise2015-04-17 19:27 8.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_E4Ix3aB.concise.blc2015-04-17 19:27 3.4KBLC format prediction and alignment data
[ ]jp_E4Ix3aB.concise.fasta2015-04-17 19:27 2.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_E4Ix3aB.concise.pdf2015-04-17 19:27 25KPDF prediction and alignment data
[ ]jp_E4Ix3aB.concise.ps2015-04-17 19:27 402KPrediction: coiled-coil, solvent, alignment
[ ]jp_E4Ix3aB.fasta2015-04-17 19:21 122 Input query sequence in FASTA format
[ ]jp_E4Ix3aB.full_MSA.fasta2015-04-17 19:27 2.4KFull MSA before JPred filters in FASTA
[TXT]jp_E4Ix3aB.full_MSA.fasta.noGaps.html2015-04-17 19:27 4.3KFull MSA before JPred filters in FASTA
[TXT]jp_E4Ix3aB.full_MSA.fasta.withGaps.html2015-04-17 19:27 7.8KFull MSA before JPred filters in FASTA
[ ]jp_E4Ix3aB.hmm2015-04-17 19:27 20KHHMer2 profile of the alignment
[TXT]jp_E4Ix3aB.html2015-04-17 19:27 17KHTML prediction and alignment data
[ ]jp_E4Ix3aB.input2015-04-17 17:50 115 Raw input data for analysis
[ ]jp_E4Ix3aB.jalview2015-04-17 19:27 3.0KJalview annotation file for alignment
[ ]jp_E4Ix3aB.jnet2015-04-17 19:27 4.0KJnet secondary structure output
[TXT]jp_E4Ix3aB.profile2015-04-17 19:25 18KPSIBLAST profile from alignment
[ ]jp_E4Ix3aB.pssm2015-04-17 19:27 23KPSIBLAST PSSM for Jnet
[TXT]jp_E4Ix3aB.results.html2016-02-15 12:17 54KJPred results page
[TXT]jp_E4Ix3aB.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_E4Ix3aB.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_E4Ix3aB.seq2015-04-17 17:50 122 Sequence data file
[TXT]jp_E4Ix3aB.simple.html2015-04-17 19:27 1.3KBrief HTML: sequence and prediction only
[TXT]jp_E4Ix3aB.svg.html2015-04-17 19:27 46KJalview SVG summary of results
[ ]jp_E4Ix3aB.tar.gz2015-04-17 19:27 62KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.